Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02310 ATGTTGTCATTGTCGAAGAACAACAACATGCCCAATCTCATTTTATTTGGTCCTCCCAGAACCAGCAAAACCACTAGCATTCTCGCTCTCATGCACGAGCTTCTTGGAGGACCAAATTGCAAGGAAGCTGTTCTCAAACTAAACGCTTCCGATGATAGTTTTGCTCTGGAAATTGCTTCTGGGATATCAAAGATGTTTGCTCAGAAGAAAGTCACGCTGAGCCCGGGGAGGCACAAGATAGTGATACTGGATGAAGCTGATAGGTGA 267 0.4494 MLSLSKNNNMPNLILFGPPRTSKTTSILALMHELLGGPNCKEAVLKLNASDDSFALEIASGISKMFAQKKVTLSPGRHKIVILDEADR 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02310 88 Gene3D - 1 88 IPR027417 -
Gma15g02310 88 Pfam ATPase family associated with various cellular activities (AAA) 13 88 IPR003959 GO:0005524|GO:0016887
Gma15g02310 88 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 88 IPR027417 -
Gma15g02310 88 CDD AAA 2 88 - -
Gma15g02310 88 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 3 87 - -
Gma15g02310 88 PANTHER REPLICATION FACTOR C SUBUNIT 2 3 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02310 Gma-Chr15 48371223 48372283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02310 4 87 Core DNA Replication Machinery Family AT1G63160 69.048 9.58e-32 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02310 K10755 - gmx:100775926 124.02