Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02293 ATGTCTCATTCTTCATCTCTCACTCTTGTTTTACTGTGTCTTTACAACATCTGTTTCTCAGAGGCTCTCAAGAGTGGCTTCAGTGTGGAGATCATCCATCGTGACTCATCACGATCACCATTCTATCTTGCAACAGAAACTCAATTCCAACGAGTTACCAATGCTGTGCGTCGTTCCATGAACCGTGCCAATCATTTCAACCAAATTTCTGTCTACTCAAATGCAGTTGAATCTCCTGTAACACTACTAGATGATGGTGACTACTTGATGAGCTATTCACTTGGAACCCCACCATTCCCAGTTTATGTGCAAGGTACCTCTTGCTCCTCTGATGAAAGGAAAATTTGTGAGCATACTGTTAACTATAAGGATGGATCACACTCACAAGGAGATCTTAGTGTTGAGACCGTTACTTTAGGCTCCTCCAATGACCCTTTTGTCCATTTTCCAAGAACTGTGATAGGATGCATACGTAACACTAATGTGTCATTTGATAGCATTGGTATAGTTGGCCTTGGAGGAGGACCTGTGTCCCTTGTATCTCAACTGAGTTCTTCAACAGGTAAGAAATTTTCCTACTGTTTGGCACCAATATCTGACAGATCTAGCAAACTCAAATTTGGAGATGCTGCAATGGTTTCTGGGGATGGGACTGTCTCAACACGGATAGTCTTTAAAGATTGGAAAAAGTTTTACTATCTAACCTTGGAAGCATTTAGTGTGGGAAACAATAGAATAGAGTTCAGAAGCTCCTCATCTAGATCTAGTGGAAAGGGAAATATCATAATTGACTCAGGTACAACATTCACTGTTTTGCCAGATGATGTTTACTCAAAGTTGGAATCAGCAGTAGCAGATGTGGTTAAATTAGAACGTGTTGAGGATCCACTTAAACAGTTCAGCCTTTGCTATAAAAGTACATATGATAAAGTAGATGTACCAGTGATCACGGCACATTTTAGTGGTGCAGATGTCAAGTTAAATGCCCTCAACACCTTTATTGTAGCAAGTCATAGGGTAGTATGCTTGGCTTTCCTATCAAGTCAATCTGGTCCCATCTTTGGGAACTTAGCTCAGCAAAACTTCTTGGTTGGATATGACCTACAAAGGAAAATAGTCTCCTTTAAGCCCACAGATTGCACTAAGCAGTGA 1152 0.4071 MSHSSSLTLVLLCLYNICFSEALKSGFSVEIIHRDSSRSPFYLATETQFQRVTNAVRRSMNRANHFNQISVYSNAVESPVTLLDDGDYLMSYSLGTPPFPVYVQGTSCSSDERKICEHTVNYKDGSHSQGDLSVETVTLGSSNDPFVHFPRTVIGCIRNTNVSFDSIGIVGLGGGPVSLVSQLSSSTGKKFSYCLAPISDRSSKLKFGDAAMVSGDGTVSTRIVFKDWKKFYYLTLEAFSVGNNRIEFRSSSSRSSGKGNIIIDSGTTFTVLPDDVYSKLESAVADVVKLERVEDPLKQFSLCYKSTYDKVDVPVITAHFSGADVKLNALNTFIVASHRVVCLAFLSSQSGPIFGNLAQQNFLVGYDLQRKIVSFKPTDCTKQ 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02293 383 PANTHER OS07G0603500 PROTEIN-RELATED 103 381 - -
Gma15g02293 383 PANTHER OS07G0603500 PROTEIN-RELATED 5 102 - -
Gma15g02293 383 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 103 381 - -
Gma15g02293 383 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 5 102 - -
Gma15g02293 383 CDD pepsin_A_like_plant 88 380 IPR034161 -
Gma15g02293 383 SUPERFAMILY Acid proteases 81 380 IPR021109 -
Gma15g02293 383 Gene3D Acid Proteases 103 206 IPR021109 -
Gma15g02293 383 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 261 272 IPR001969 GO:0004190|GO:0006508
Gma15g02293 383 ProSiteProfiles Peptidase family A1 domain profile. 65 376 IPR033121 -
Gma15g02293 383 Pfam Xylanase inhibitor C-terminal 232 376 IPR032799 -
Gma15g02293 383 Pfam Xylanase inhibitor N-terminal 106 209 IPR032861 -
Gma15g02293 383 Gene3D Acid Proteases 207 383 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02293 Gma-Chr15 48014854 48016150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02293 104 382 Miscellaneous Gene Families AT1G77480 23.701 5.69e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02293 - - gmx:100812061 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01741 13 32628251 32629555 Gma15g02293 15 48014854 48016150 GST