Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02251 ATGGAACGTGTTCAAGAATTCAAGATTGGAGATTGGGTTTGCATTCGTCCTTTTCTTACATCTACAAAGTATGGATTAGGATCTGTGACACTGGGAAGCATCGGCATTGTATATTGTATCAGACCAGATAGTAGTCTGTTAATAGAACTGAGTTATCTTCCAACCTCATGGCATTGTGAACCGGAAGAGGTTGAGCATGTAGTTCCTTTCAGGGATGGAAATTGGGTCAGAGTTAAAGCTTCAGTGTCTGCTCCAAGATATGGGTGGGAAGATGTTACAAGAAACAGTATTGGAGTAATTCATAACTTGGAGGAGGATGGCGATATGGGTATTGCCTTTTGCTTCAGGAATGAGCTTTTTCCTTTCTCAGTCACTGATGGTGAGAAAGTTCCACGTTTTGAGGTGGGGCAAGAAATTCGTGTGATGCCATCTGTTAACCAGCCACGGCTCGGATGGTTAAACGAATCACCCTCTACTGTTGGAAAAACAGCAAGAATTGATTTGGATGGTGCACTCAATGTAGGTAGGCAAAGCTTGTGGAAAGTTTCTCCTGGGGATGTGGAACAACTTCCAGGATTTGAAGTTGGTGAATGGGTTTGCTCAAAACCGAGCCCAGGAAGCAGATCAAGCAGTGACTTGAATGGTGCTAGTTGTATAGCTGTTGTGCATAGTGTTCAGGATTCTGGGCTCAGAACCAGTTTGGTGGAACCAAGGTGGGGTTGGAGAGGATCTCGGCCTGAATCTCAATGCGTTTTAACCGGCATTCATGCTGATGGAGAAGTGAAGGCGGCATTCTTTGGTTTGCCAGGATTGTGGAGAGGAGACCCTGCAGACCTGGAAATTGAACAGATGTTTATGTTGCCTTTTGTGGAGAGCAAGAAAGGAACCAAGATTTGGGTGGTCCGGTCCGGGCACACACATGCGAGCATTGGAACGATACAAGCCATCAATGCTAATGGAAAGCTCCGAATATACACGCCAGAGGGATCAAAAGCATGGATGTTGGACCCTTCAGAAGTGGAGGTGGTGGAAGAGAAGGGGTTCTGCATTGGAGATTGGGTTAAGGTTAGGCCATTTGAAGTGGGAGGCATTGTTAGAATCAAAGATGGATTGGTGACCCCACGGTGGGGATGGGAAATGGTGACACATTCCAGTAAGGGAAGGGTGGTAGGAGTAGATGCAAATGGCAAGGTAAGAATAAAGTTTCAGTGGATGGAAAGGGAGGCCTTGGGTAGGAGACCCTGCTGA 1248 0.4631 MERVQEFKIGDWVCIRPFLTSTKYGLGSVTLGSIGIVYCIRPDSSLLIELSYLPTSWHCEPEEVEHVVPFRDGNWVRVKASVSAPRYGWEDVTRNSIGVIHNLEEDGDMGIAFCFRNELFPFSVTDGEKVPRFEVGQEIRVMPSVNQPRLGWLNESPSTVGKTARIDLDGALNVGRQSLWKVSPGDVEQLPGFEVGEWVCSKPSPGSRSSSDLNGASCIAVVHSVQDSGLRTSLVEPRWGWRGSRPESQCVLTGIHADGEVKAAFFGLPGLWRGDPADLEIEQMFMLPFVESKKGTKIWVVRSGHTHASIGTIQAINANGKLRIYTPEGSKAWMLDPSEVEVVEEKGFCIGDWVKVRPFEVGGIVRIKDGLVTPRWGWEMVTHSSKGRVVGVDANGKVRIKFQWMEREALGRRPC 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02251 415 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 70 227 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Gma15g02251 415 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG-LIKE 302 358 - -
Gma15g02251 415 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG-LIKE 70 227 - -
Gma15g02251 415 Pfam Mind bomb SH3 repeat domain 348 403 IPR040847 -
Gma15g02251 415 Pfam Mind bomb SH3 repeat domain 293 340 IPR040847 -
Gma15g02251 415 Pfam Mind bomb SH3 repeat domain 193 279 IPR040847 -
Gma15g02251 415 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG-LIKE 355 408 - -
Gma15g02251 415 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG-LIKE 2 73 - -
Gma15g02251 415 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG-LIKE 230 287 - -
Gma15g02251 415 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 355 408 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Gma15g02251 415 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 2 73 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Gma15g02251 415 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 230 287 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Gma15g02251 415 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 302 358 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02251 Gma-Chr15 47136122 47138999 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02251 K16279 - gmx:100783181 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02251 15 47136122 47138999 Gma11g01750 11 19626112 19638674 GST