Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02249 ATGATTGGAGAGTGCTTGCAGTTCAAGCCATCTAAAAGGTCTAGGTTTACTGCAATGTTGGCAATATTTCTCCGTCATTCGCAGGGAATGCCGCGCAGCCTTCCTGCAAGCCCAGATAAAAAAACCCATTCCATCTTCATCAATGTGTGTCTCGGGGATGTTAGAAGTGTTAGTGATCTTCTTTTCAAGGCTGCATCAGACTATGGCAGCAACAGCCTATCTTCTCTGCTGGAAGCTCAAAATGCTGATGAACAAACTGCTCTCCACTTAGCTTGTAGATGTGGCAGTGCAGAACTTGTTGAGGCAATTTTGGAGTATGAAGAAGCAAATGTTGACGTCTTGGACAAAGATGGAGATCCTCCTCTTGTTTATGCATTAGCTGCTGGATCCCCAGAATGCGTTCGCAGTCTTATCAAAAGAGGTGCTAATGTGAGGCCACAATTAAGAGATGGCTTTGGCCCGTCTGTTGCTCATGTTTGTGCACATCATGGCCAACCAGAATGCATGCGAGAATTACTATTAGCTGGAGCTGATCCTAATGCAGCAGATGATGAAGGTGAATCTATCCTGCATAGAGCAGTTGCCAAGAAGTCCGCTGACTGTGCCCTTGTGATACTGGAAAATGGGGGAAATGGATCAATTGCCATCTTGAATCCAAAGAATATGTCTTAA 672 0.4494 MIGECLQFKPSKRSRFTAMLAIFLRHSQGMPRSLPASPDKKTHSIFINVCLGDVRSVSDLLFKAASDYGSNSLSSLLEAQNADEQTALHLACRCGSAELVEAILEYEEANVDVLDKDGDPPLVYALAAGSPECVRSLIKRGANVRPQLRDGFGPSVAHVCAHHGQPECMRELLLAGADPNAADDEGESILHRAVAKKSADCALVILENGGNGSIAILNPKNMS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02249 223 ProSiteProfiles Ankyrin repeat profile. 152 184 IPR002110 GO:0005515
Gma15g02249 223 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1 222 - -
Gma15g02249 223 SUPERFAMILY Ankyrin repeat 61 210 IPR036770 -
Gma15g02249 223 ProSiteProfiles Ankyrin repeat profile. 117 149 IPR002110 GO:0005515
Gma15g02249 223 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1 222 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Gma15g02249 223 Gene3D - 30 221 IPR036770 -
Gma15g02249 223 ProSiteProfiles Ankyrin repeat profile. 83 116 IPR002110 GO:0005515
Gma15g02249 223 Pfam Ankyrin repeats (many copies) 155 202 IPR002110 GO:0005515
Gma15g02249 223 SMART ANK_2a 185 216 IPR002110 GO:0005515
Gma15g02249 223 SMART ANK_2a 152 181 IPR002110 GO:0005515
Gma15g02249 223 SMART ANK_2a 117 146 IPR002110 GO:0005515
Gma15g02249 223 SMART ANK_2a 83 113 IPR002110 GO:0005515
Gma15g02249 223 ProSiteProfiles Ankyrin repeat region circular profile. 117 144 - -
Gma15g02249 223 Pfam Ankyrin repeats (3 copies) 61 145 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02249 Gma-Chr15 47129157 47130229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02249 47 211 Ion Channels AT2G26650 26.667 3.66e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02249 K16279 - gmx:100783181 360.918