Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02237 ATGATGGAGGAAATTCCTGGGAATGAAGAAGCTGCTGAGCCTCCAGCATCATCTCAATCACCTGCTGATGTGCCACATAATATGGAAACAGAACAAATGACTGCTACAAAGTATTCTATTATCAGTAGGAATGGGGTTGGGACCACAGGAAAACACTTACCTTTACTTGTGAATCTCTTCGAAGTTGTTGTTAATGTTCCAGACACAGTATTTTTCCAGTATAGTGGCATTGGGAGAAAAGTGATTGATAAGCTTTATCAAACATACTCTTCTGAACTTGGTTGCAAAAGGTTTGTATACGATGGAGGGAAAACTTTGTACACAGTCGGTCCTCTGCCGCTAAATAAGTATGAGTTCAAAGTGTTGCTGGAGAAATCATTTACAAAACGTTTTAATATGAAGGTTAAAAATGATGACGACAATAGTGAAGGGCAGACAGTGGATATTACTGTTTATGAATATTTTGCCAAACACTGTGGCATAGAGCTGACCTCATCTGCTTATCTTCCATGTCTTGATGTTGGGAAACCAAAATGGCCCATCTATCTTCCCTTGGAGCTATTTTCACTTGTTTCCCTCCAATGGTATACAAAGGTTTTATCTCCGATGCCAAGAGCGTCTTTAGTTGAAAAATCACGCCAAAAGCCTCAAGATAGAATCAAAATTCTGAAAAGTGCTGTAGGAAATTGCTACAACGATGATCCTGTTCTTTCTTCCTGTGGCATTTTTATTGAGAAACAAGTGAGTCTGATTGAAGGTCGTGTTCTTGAGACACCAAAGGCATCCAAGGAGGAGATGATTGATGCTCTATACAAGCCATTGGAAAATGAGAGTGATGATGGTATTATCAGGAACCAAAGGAGCACAATTGCAACCTCAGTTGTGGCACCCATATGTTATGCTCACCATGCTGCAGCTCAGATGGGACAACTTTTGAATTTAGATGATTTAACAGAAACAGGTTTAAGTCCTGCTTCAGAGGGAAACATTCCCATCCCTGAGCTTCCAATGTTGCATAGGAATGTCAGGAGTTCCATGTTCTTCTGTTGA 1050 0.4029 MMEEIPGNEEAAEPPASSQSPADVPHNMETEQMTATKYSIISRNGVGTTGKHLPLLVNLFEVVVNVPDTVFFQYSGIGRKVIDKLYQTYSSELGCKRFVYDGGKTLYTVGPLPLNKYEFKVLLEKSFTKRFNMKVKNDDDNSEGQTVDITVYEYFAKHCGIELTSSAYLPCLDVGKPKWPIYLPLELFSLVSLQWYTKVLSPMPRASLVEKSRQKPQDRIKILKSAVGNCYNDDPVLSSCGIFIEKQVSLIEGRVLETPKASKEEMIDALYKPLENESDDGIIRNQRSTIATSVVAPICYAHHAAAQMGQLLNLDDLTETGLSPASEGNIPIPELPMLHRNVRSSMFFC 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02237 349 MobiDBLite consensus disorder prediction 1 25 - -
Gma15g02237 349 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 285 348 - -
Gma15g02237 349 Gene3D - 282 349 IPR036397 GO:0003676
Gma15g02237 349 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 32 123 - -
Gma15g02237 349 PANTHER PROTEIN ARGONAUTE 6 285 348 - -
Gma15g02237 349 SUPERFAMILY PAZ domain 140 228 IPR036085 GO:0005515
Gma15g02237 349 PANTHER PROTEIN ARGONAUTE 6 130 268 - -
Gma15g02237 349 Gene3D paz domain 105 194 - -
Gma15g02237 349 Pfam PAZ domain 140 207 IPR003100 GO:0005515
Gma15g02237 349 Pfam N-terminal domain of argonaute 53 134 IPR032474 -
Gma15g02237 349 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 130 268 - -
Gma15g02237 349 PANTHER PROTEIN ARGONAUTE 6 32 123 - -
Gma15g02237 349 CDD PAZ_argonaute_like 143 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02237 Gma-Chr15 46917472 46921819 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02237 150 259 Eukaryotic Initiation Factors Gene Family AT5G43810 35.135 4.79e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02237 K11593 - gmx:100778875 231.106