Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02236 ATGGCAGCAGAAATGGTTGCTGGTGCTCTTGTTTCTACTTTCGTTGAGAAGACAATTGACAGTTTGGCTTCTCGTTTTGTGGACTACTTTCGTGGAAGAAAACTCAATAAGAAGCTGCTGAGCAAAATCAAGGTGAAGCTACTAGCCATCGATGTTCTTGCTGATGATGCAGAACTTAAGCAGTTCAGAGATGCACGTGTCAGAGATTGGCTTCTTAAGGCCAAAGATGTAGTGTTTGAAGCAGAGGATCTCTTGGAAGAAATAGACTATGAACTCTCCAAATGCCAAGTAGAAGCTGAATCCCAGCCCATTCTTAACAAGGTGAGCAATATCTTCAAACCTTCTTCTTTGAGCTCTTTTGACAAGGAAATTGAATCAAGGATGGAACAAATCCTTGATGACCTGGATGATCTTGAAAGCCAAAGTGGTTATCTAGGTTTGACAAGGACTAGTGGTGTTGGGGTTGGATCAGGATCGGGTAGTAAAGTGTTAGAGAAATTGCCATCAACATCTTCGGTGGTAGAAAGTGATATTTATGGCAGAGATGATGACAAAAAATTGATCTTCGACTGGATCACTTCTGACACTGATGAAAAGCTATCAATACTTTCTATCGTGGGCATGGGCGGGTTGGGTAAGACCACGCTTGCCCAACTTGTATACAATGACCCAAGAATAGTGAGTAAGTTTGATGTCAAAGCTTGGATCTGTGTTTCAGAGGAATTTGATGTTTTCAACGTATCAAGAGCAATTCTTGACACGATTACTGATTCGACTGATCATGGTAGAGAGCTAGAAATAGTTCAGAGAAGACTAAAAGAAAAATTGGCAGATAAAAAATTTCTCGTCGTTTTGGATGACGTTTGGAACGAAAGCAGGCCTAAATGGGAAGCTGTGCAGAATGCTCTTGTTTGTGGAGCTCAGGGAAGTAGGATCCTTGTCACAACACGCAATGAGGAAGTTGCTTCTACCATGAGGTCAAAAGAACACAAGCTGGAGCAATTACAAGAAGATTATTGCTGGCAATTGTTCGCAAAACATGCATTCAGAGATGATAATCTTCCACGAGATCCAGGATGCCCAGTGATTGGTATGAAGATTGTTAAAAAATGTAAAGGACTTCCTCTGGCCTTGAAGTCAATGGGAAGTCTATTACACAACAAACCATCTGCCTGGGAATGGGAAAGCATGTTGAAAAGCGAAATATGGGAATTAAAGGACAGTGGTATTGTTCCTGCTTTAGCATTGAGCTATCACCACCTTCCTCTCCATCTCAAGACATGCTTTGCATACTGTGCTTTATTCCCCAAGGATTATGAGTTTGACAGGGAGTGTTTAATTCAGTTGTGGATGGCTGAAAATTTCCTAAACTGCCATCAAGGCAGTAAGAGTCCAGAAGAAGTTGGCCAGCTGTACTTCAATGATTTATTATCAAGGTCCTTCTTTCAACAATCAAGCAAATATAAAGAAGGATTTGTCATGCATGACCTTCTAAATGATTTGGCAAAATATGTTTGTGGGGACATCTATTTCAGCGAGTTCACTATTCAGCAATTAGGAGAGCTCAATCTTCATGGAAGATTATCATTTAGCGAGCTGCAGAATATTGAGAATTCCTCAGATGCATTAGCTGCAGATTTGAAAAATAAAACAGACCTTGTGAAACTAGAGTTTGGATGGAATTCGCACCGGAACCCTGATGATCATGCCAAAGAAAGGGATGTAGTTGTAATTGAGAATCTACAACCTTCCAAACACCTGAAGGAGTTATCAATCATCAACTATGGTGGTAAACAATTCCCAAATTGGTTATCCGATAATTCTTTATCAAATGTGGTGTCCTTAGTGTTGCGCAACTGTCAATCTTGCCAACGTTTGCCTTCCCTTGGACTTTTGCCAATTCTCAAGAAGCTTGAGATTTCAAGTCTTGATGGGATAGTGAGCATTGGCGCTGATTTTCATGGGAATAGCACTTCTTCATTTCCATCGTTGCAAACATTGAAGTTCTCCTTTATGAAAGCATGGGAAAAATGGGAATGTCAAGCTGTGACAGGTGCTTTTCCATGTCTTCAATATCTTTCTATAAGGTATTGTCCCAAGCTGAAAGGTGACCTCCCAGAGCAACTTCTTCCTTTAAAGAAGCTACAAATTAGTGAGTGCAAACAACTTGAGGCTTCAGCTCCCAGGGCTCTAGTACTAGACCTGAAAGACACTGGAAAGCTGCAACTGCAACTTGACTGGGCTACTTTGAAAATGCTCAGCATGGGCGGACACAGCATGGAAGCATtgttgctggaaaagtctgatactttgaaaaacctgtatatttattgTTGCCCGATAGATGAAATGTGTTGCGATTGTGGAATGAGTGATGATGGCCGTGACTCTCTAAAGACTTTTCCGCTATATTTCTTCCCAGCACTCAGGACCCTTTGTCTCAGTGGCTTTCGTAATCTACAGATGTTTACACAGGATCACACCCTTAATCATCTTCAAGATCTGACAATCAAAAAGTGCCCTCAATTAGAATCATTGCCTGGAAGCATGCATATGCACCTTCCATCTCTCAAGAAGCTAAGTATATCTGATTGTCCAAGAGTAGAGTCGTTCCCTGAAGGAGGTTTGCCATCAAATCTAAAACATATGACACTCTATAAATTCTCGTCCGGACTCATGGCCTCACTGAAAGGGGCTTTGGGAGACAATCCCTCTCTGGAAAGCTTGGGGATAATAGGGCAGGATGCGGAATCTTTTCCTAATGAAGGTTTGCTGCCACTCTCTCTTACTTATCTATTGATCCATGCTTTTCCAAATCTAAAAAAACTGGACTACAAGGGGCTCTGTCAGCTCTCCTCTCTCAAGAAATTGACTCTTCGTTTCTTAcccaacctccaacagctaccagaggagggtcttcccaaatccatttcatctcttgaactagatggctgccccaacctccaacagctaccagaggagggtcttcccaaatccattacacatcttaagattagaggctgccccaaGCTCAAGCAGCGTTGCCAGAACCCAGGAGGCGAAGACTGGCCAAAGATTGCTCACATTCCAACCGTGGAAATTAGGTAG 3108 0.3929 MAAEMVAGALVSTFVEKTIDSLASRFVDYFRGRKLNKKLLSKIKVKLLAIDVLADDAELKQFRDARVRDWLLKAKDVVFEAEDLLEEIDYELSKCQVEAESQPILNKVSNIFKPSSLSSFDKEIESRMEQILDDLDDLESQSGYLGLTRTSGVGVGSGSGSKVLEKLPSTSSVVESDIYGRDDDKKLIFDWITSDTDEKLSILSIVGMGGLGKTTLAQLVYNDPRIVSKFDVKAWICVSEEFDVFNVSRAILDTITDSTDHGRELEIVQRRLKEKLADKKFLVVLDDVWNESRPKWEAVQNALVCGAQGSRILVTTRNEEVASTMRSKEHKLEQLQEDYCWQLFAKHAFRDDNLPRDPGCPVIGMKIVKKCKGLPLALKSMGSLLHNKPSAWEWESMLKSEIWELKDSGIVPALALSYHHLPLHLKTCFAYCALFPKDYEFDRECLIQLWMAENFLNCHQGSKSPEEVGQLYFNDLLSRSFFQQSSKYKEGFVMHDLLNDLAKYVCGDIYFSEFTIQQLGELNLHGRLSFSELQNIENSSDALAADLKNKTDLVKLEFGWNSHRNPDDHAKERDVVVIENLQPSKHLKELSIINYGGKQFPNWLSDNSLSNVVSLVLRNCQSCQRLPSLGLLPILKKLEISSLDGIVSIGADFHGNSTSSFPSLQTLKFSFMKAWEKWECQAVTGAFPCLQYLSIRYCPKLKGDLPEQLLPLKKLQISECKQLEASAPRALVLDLKDTGKLQLQLDWATLKMLSMGGHSMEALLLEKSDTLKNLYIYCCPIDEMCCDCGMSDDGRDSLKTFPLYFFPALRTLCLSGFRNLQMFTQDHTLNHLQDLTIKKCPQLESLPGSMHMHLPSLKKLSISDCPRVESFPEGGLPSNLKHMTLYKFSSGLMASLKGALGDNPSLESLGIIGQDAESFPNEGLLPLSLTYLLIHAFPNLKKLDYKGLCQLSSLKKLTLRFLPNLQQLPEEGLPKSISSLELDGCPNLQQLPEEGLPKSITHLKIRGCPKLKQRCQNPGGEDWPKIAHIPTVEIR 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02236 1035 Gene3D - 13 141 - -
Gma15g02236 1035 SUPERFAMILY L domain-like 797 1026 - -
Gma15g02236 1035 Gene3D Ribonuclease Inhibitor 794 1025 IPR032675 -
Gma15g02236 1035 Gene3D - 412 504 IPR036388 -
Gma15g02236 1035 Coils Coil 318 338 - -
Gma15g02236 1035 PRINTS Disease resistance protein signature 202 217 - -
Gma15g02236 1035 PRINTS Disease resistance protein signature 852 868 - -
Gma15g02236 1035 PRINTS Disease resistance protein signature 275 289 - -
Gma15g02236 1035 PRINTS Disease resistance protein signature 371 385 - -
Gma15g02236 1035 Gene3D Ribonuclease Inhibitor 507 739 IPR032675 -
Gma15g02236 1035 Pfam NB-ARC domain 184 399 IPR002182 GO:0043531
Gma15g02236 1035 SUPERFAMILY L domain-like 518 787 - -
Gma15g02236 1035 PANTHER OS05G0414200 PROTEIN 17 512 - -
Gma15g02236 1035 PANTHER OS05G0414200 PROTEIN 513 848 - -
Gma15g02236 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 432 IPR027417 -
Gma15g02236 1035 PANTHER DISEASE RESISTANCE PROTEIN RP 17 512 IPR044974 GO:0006952
Gma15g02236 1035 PANTHER DISEASE RESISTANCE PROTEIN RP 513 848 IPR044974 GO:0006952
Gma15g02236 1035 Pfam Rx N-terminal domain 11 101 IPR041118 -
Gma15g02236 1035 Coils Coil 121 141 - -
Gma15g02236 1035 CDD AAA 179 303 - -
Gma15g02236 1035 Gene3D - 161 334 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02236 Gma-Chr15 46894624 46898797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02236 203 435 WRKY Transcription Factor Family AT5G45050 27.917 1.14e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02236 - - gmx:100784466 958.362