LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma15g02233	ATGGAACTCTTCGCCGATATTGCCCCAAAAACCGCCGAGAATTTCAGGAAAGTAGGATTGCCTGTTGGCTACAAGGTTTGTCAAATTCATAGAGTGATTAAGGATTTTATGATTCAAGATGGTGATTTTGTAAAGGGTGATGGTAGTGGATGTGTTTCCATCTATGGACTCAAGTTTGATGATGAAAACTTTACTGCGAAACACACTGGTCCTGGCCTTCTGTCCATGGCAAATAGCGGACCAAATACTAATGGTTGTCAGTTCTTTATAACATGTGGAAAATGCGACTGGCTTGACAACAAGCATGTTGTCTTTGGGAGAGTGCTTGGAGATGGACTTTTGGTTGTCAGGAAGATTGAGAACGTGCCAACCGGACCCAATAACCGGCCAAAATTAGCATGCGTCATTGCTGAATGTGGTGAAATGTAA	429	0.4266	MELFADIAPKTAENFRKVGLPVGYKVCQIHRVIKDFMIQDGDFVKGDGSGCVSIYGLKFDDENFTAKHTGPGLLSMANSGPNTNGCQFFITCGKCDWLDNKHVVFGRVLGDGLLVVRKIENVPTGPNNRPKLACVIAECGEM	142

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma15g02233	142	SUPERFAMILY	Cyclophilin-like	1	142	IPR029000	-
	Gma15g02233	142	Gene3D	-	1	142	IPR029000	-
	Gma15g02233	142	PANTHER	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	1	142	-	-
	Gma15g02233	142	Pfam	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	2	140	IPR002130	GO:0000413\|GO:0003755
	Gma15g02233	142	PANTHER	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE H	1	142	-	-
	Gma15g02233	142	ProSiteProfiles	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile.	1	141	IPR002130	GO:0000413\|GO:0003755
	Gma15g02233	142	PIRSF	Peptidylpro_ismrse	1	142	IPR024936	GO:0003755
	Gma15g02233	142	PRINTS	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	29	41	IPR002130	GO:0000413\|GO:0003755
	Gma15g02233	142	PRINTS	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	87	99	IPR002130	GO:0000413\|GO:0003755
	Gma15g02233	142	PRINTS	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	100	115	IPR002130	GO:0000413\|GO:0003755
	Gma15g02233	142	PRINTS	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	72	87	IPR002130	GO:0000413\|GO:0003755
	Gma15g02233	142	PRINTS	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	3	18	IPR002130	GO:0000413\|GO:0003755

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma15g02233	Gma-Chr15	46763368	46771086	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma15g02233	1	130	U-box Gene Family	AT5G67530	46.565	3.28e-28	106

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma15g02233	K09567		-	gmx:102660734	281.567