Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02232 ATGACCCATCTATCTTCCCTTGGAGAGAGGAAACATTGTGATATATATGGGCCTTGGAAAAAGAAGTGTTTGAGTGAAATTGGGGTTGTCACACAGTGCATTGCCCCTGTCAAGATCACTGATCAATACCTTACTAATGTACTTCTTAAAATCAATTCTAAGCTTGGAGGAATAAATTCTCTGTTGACAATAGAGCATTCTGGGCATCTTCCCCTAATTAAGGATACCCCAACAATGATTTTGGGGATGGATGTCTCTCACAATTTGCCTGGTCGATTAGATAGTCCATCAATAGCACTGAtcaattttaagggcatttga 321 0.3769 MTHLSSLGERKHCDIYGPWKKKCLSEIGVVTQCIAPVKITDQYLTNVLLKINSKLGGINSLLTIEHSGHLPLIKDTPTMILGMDVSHNLPGRLDSPSIALINFKGI 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02232 106 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 5 100 - -
Gma15g02232 106 PANTHER PROTEIN ARGONAUTE 6 5 100 - -
Gma15g02232 106 Gene3D - 4 68 - -
Gma15g02232 106 Pfam Piwi domain 9 99 IPR003165 GO:0003676
Gma15g02232 106 ProSiteProfiles Piwi domain profile. 1 101 IPR003165 GO:0003676
Gma15g02232 106 SUPERFAMILY Ribonuclease H-like 10 100 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02232 Gma-Chr15 46742466 46743782 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02232 15 101 Eukaryotic Initiation Factors Gene Family AT1G48410 45.556 5.02e-21 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02232 K11593 - gmx:100778875 177.563