Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02225 ATGAGGAGTCTTGTTTCAGATATTCCATCTGACCTTGTGATAAAAATCTATGACACTACTTATCTGCTACACAAGTCTTCCCTTCTTCCAAAATGTGGCCTTCTACGAAGGCTTTGCTCAGATTCTAGTGATTCTGAGAATGTTCCTCTAGAGCTTCATGATATGCCTGGAGGGGCAGATGCATTTGAAATCTGTGCTAAGTTCTGCTATGGAGTTTCAATCAACATCAGTGCTCATAACTTTGTACCCGCACTCTGTGCTGCTAAACTCCTCCAAATGAACGAGTCCATTGAGAAAGGAAACTTTGTAAGCAAACTTGAGGCTTTCTTCAGTTCATGCATTCTTGAAGGATGGAAAGACTCTATTGCAGCACTGCAGGCCACTAACAAGTTACCGGAGTGGTCTGAGACGAACGACGATGAACCAGTAGAACATTGGTCAATGGGACACTCAAACAACGACGGTCAAACCAAAGACCCGTCGTTGACTGATGACGCCAACAACGACGGTCACCAAACGCCCGACGTTGATTGGCGTCATTCAACGACGTTCATCGTCAGCCCGACGTGGACATCATCGAAGTCAACGACGGTTGACGACAACGTTGATATCATAAATACAACGCCGGCTATAACGAGGCGCACGACGTGGACTGTTGAAGACAACGACGGCCATTACGCCATACCCGTCGTTGCTTTCACGGTTACGACGACGTTGATGACTTAA 726 0.4642 MRSLVSDIPSDLVIKIYDTTYLLHKSSLLPKCGLLRRLCSDSSDSENVPLELHDMPGGADAFEICAKFCYGVSINISAHNFVPALCAAKLLQMNESIEKGNFVSKLEAFFSSCILEGWKDSIAALQATNKLPEWSETNDDEPVEHWSMGHSNNDGQTKDPSLTDDANNDGHQTPDVDWRHSTTFIVSPTWTSSKSTTVDDNVDIINTTPAITRRTTWTVEDNDGHYAIPVVAFTVTTTLMT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02225 241 MobiDBLite consensus disorder prediction 149 169 - -
Gma15g02225 241 Gene3D Potassium Channel Kv1.1; Chain A 2 100 IPR011333 -
Gma15g02225 241 ProSiteProfiles BTB domain profile. 10 78 IPR000210 GO:0005515
Gma15g02225 241 SUPERFAMILY POZ domain 4 97 IPR011333 -
Gma15g02225 241 Pfam BTB/POZ domain 9 99 IPR000210 GO:0005515
Gma15g02225 241 MobiDBLite consensus disorder prediction 133 177 - -
Gma15g02225 241 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 3 137 - -
Gma15g02225 241 PANTHER OS12G0117600 PROTEIN 3 137 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02225 Gma-Chr15 46293786 46295286 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02225 8 136 EF-hand Containing Proteins AT3G44820 37.121 5.29e-24 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gma15g02225 BTB 0.0003 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02225 - - gmx:100819906 271.552