Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02123 ATGAAGAGGTCTCCAGCATCTTCTTGTTCATCATCTACTTCCTCTGTTGGGTTTGAAGCTCCCATTGAAAAAAGAAGGCCTAAGCATCCAAGGAGGAATAATTTGAAGTCACAAAAATGCAAGCAGAACCAAACCACCACTGGTGGCAGAAGAAGCTCTATCTATAGAGGAGTTACAAGGCATAGGTGGACAGGGAGGTTTGAAGCTCACCTATGGGATAAGAGCTCTTGGAACAACATTCAGAGCAAGAAGGGTCGACAAGGGGCATATGATACTGAAGAATCTGCAGCCCGTACCTATGACCTTGCAGCCCTTAAATACTGGGGAAAAGATGCAACCCTGAATTTCCCGATAGAAACTTATACCAAGGAGCTCGAGGAAATGGACAAGGTTTCAAGAGAAGAATATTTGGCTTCTTTGCGGCGCCAAAGCAGTGGCTTTTCTAGAGGCCTGTCTAAGTACCGTGGGGTTGCTAGGCATCATCATAATGGTCGCTGGGAAGCACGAATTGGAAGAGTATGCGGAAACAAGTACCTCTACTTGGGGACATATAAAACTCAAGAGGAGGCAGCAGTGGCATATGACATGGCAGCAATAGAGTACCGTGGAGTCAATGCAGTGACCAATTTTGACATAAGCAACTACATGGACAAAATAAAGAAGAAAAATGACCAAACCCAACAACAACAAACAGAAGCACAAACGGAAACAGTTCCTAACTCCTCTGACTCTGAAGAAGTAGAAGTAGAACAACAGACAACAACAATAACCACACCACCCCCATCTGAAAATCTGCACATGCCACCACAGCAGCACCAAGTTCAATACACCCCCCATGTCTCTCCAAGGGAAGAAGAATCATCATCACTGATCACAATTATGGACCATGTGCTTGAGCAGGATCTGCCATGGAGCTTCATGTACACTGGCTTGTCTCAGTTTCAAGATCCAAACTTGGCTTTCTGCAAAGGTGATGATGACTTGGTGGGCATGTTTGATAGTGCAGGGTTTGAGGAAGACATTGATTTTCTGTTCAGCACTCAACCTGGTGATGAGACTGAGAGTGATGTCAACAATATGAGCGCAGTTTTGGATAGTGTTGAGTGTGGAGACACAAATGGGGCTGGTGGAAGCATGATGCATGTGGATAACAAGCAGAAGATAGTATCATTTGCTTCTTCACCATCATCTACAACTACAGTTTCTTGTGACTATGCTCTAGATCTATGA 1230 0.4455 MKRSPASSCSSSTSSVGFEAPIEKRRPKHPRRNNLKSQKCKQNQTTTGGRRSSIYRGVTRHRWTGRFEAHLWDKSSWNNIQSKKGRQGAYDTEESAARTYDLAALKYWGKDATLNFPIETYTKELEEMDKVSREEYLASLRRQSSGFSRGLSKYRGVARHHHNGRWEARIGRVCGNKYLYLGTYKTQEEAAVAYDMAAIEYRGVNAVTNFDISNYMDKIKKKNDQTQQQQTEAQTETVPNSSDSEEVEVEQQTTTITTPPPSENLHMPPQQHQVQYTPHVSPREEESSSLITIMDHVLEQDLPWSFMYTGLSQFQDPNLAFCKGDDDLVGMFDSAGFEEDIDFLFSTQPGDETESDVNNMSAVLDSVECGDTNGAGGSMMHVDNKQKIVSFASSPSSTTTVSCDYALDL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02123 409 CDD AP2 53 118 IPR001471 GO:0003700|GO:0006355
Gma15g02123 409 ProSiteProfiles AP2/ERF domain profile. 153 211 IPR001471 GO:0003700|GO:0006355
Gma15g02123 409 SMART rav1_2 54 123 IPR001471 GO:0003700|GO:0006355
Gma15g02123 409 SMART rav1_2 153 217 IPR001471 GO:0003700|GO:0006355
Gma15g02123 409 MobiDBLite consensus disorder prediction 221 269 - -
Gma15g02123 409 ProSiteProfiles AP2/ERF domain profile. 54 117 IPR001471 GO:0003700|GO:0006355
Gma15g02123 409 MobiDBLite consensus disorder prediction 226 269 - -
Gma15g02123 409 MobiDBLite consensus disorder prediction 1 18 - -
Gma15g02123 409 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 366 - -
Gma15g02123 409 SUPERFAMILY DNA-binding domain 53 119 IPR016177 GO:0003677
Gma15g02123 409 Pfam AP2 domain 152 203 IPR001471 GO:0003700|GO:0006355
Gma15g02123 409 Pfam AP2 domain 54 109 IPR001471 GO:0003700|GO:0006355
Gma15g02123 409 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WRI1 1 366 - -
Gma15g02123 409 Gene3D AP2/ERF domain 152 213 IPR036955 GO:0003700|GO:0006355
Gma15g02123 409 Gene3D AP2/ERF domain 54 119 IPR036955 GO:0003700|GO:0006355
Gma15g02123 409 Coils Coil 216 236 - -
Gma15g02123 409 SUPERFAMILY DNA-binding domain 152 213 IPR016177 GO:0003677
Gma15g02123 409 MobiDBLite consensus disorder prediction 1 53 - -
Gma15g02123 409 CDD AP2 152 213 IPR001471 GO:0003700|GO:0006355
Gma15g02123 409 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Gma15g02123 409 PRINTS Ethylene responsive element binding protein signature 193 213 IPR001471 GO:0003700|GO:0006355
Gma15g02123 409 MobiDBLite consensus disorder prediction 37 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02123 Gma-Chr15 42787761 42792290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02123 147 229 AP2-EREBP Transcription Factor Family AT5G57390 38.462 3.02e-12 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Gma15g02123 AP2 5.1e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02123 - - gmx:100527432 784.637