Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02120 ATGAAGCAGGTTAGGGGTGCAGGGGCAAAGCCCTTGCAGAACACAACCCTTCACTCTCTCGAGCTTCCCTTGACTCTTGCTTTGGCCACTAGCTCACGCCCGCACAAGAGCATCACCCGCTTCCACGACGAGCTCGATGTCGTCCTCGACTGCCACTTCCTTGCCCTGTCACGCGTATTCGTTGGTGGCATCTACATTGGCGCCCTCGTCCCCGCCCTCCTAACCTGCCTCCAACACATCTCTGCCACCGACCTCCGCCACCGCGCCCTCTCCCTCCTCCTCCACCTCTCCCTGGACAACGACGCCAAGGTCAGCCTCGTCGTCGAGGGCTTCCTCTCCCCCGCCGCCCCCTCCGACTGTCGCGCCCTCGCCGCCACCCTCCTCACCAGCCTCGTCGTCCTCCACGTTAACAAGGCCACCATCGGAGCCTTCCCGGGCTCCATCCACGCCCTCGTGACACTTCTCCACGACATATAG 477 0.6331 MKQVRGAGAKPLQNTTLHSLELPLTLALATSSRPHKSITRFHDELDVVLDCHFLALSRVFVGGIYIGALVPALLTCLQHISATDLRHRALSLLLHLSLDNDAKVSLVVEGFLSPAAPSDCRALAATLLTSLVVLHVNKATIGAFPGSIHALVTLLHDI 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02120 158 PANTHER U BOX DOMAIN-CONTAINING 66 156 - -
Gma15g02120 158 SUPERFAMILY ARM repeat 69 157 IPR016024 -
Gma15g02120 158 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 66 156 - -
Gma15g02120 158 Gene3D - 64 157 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02120 Gma-Chr15 42638337 42641746 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02120 70 156 U-box Gene Family AT4G21350 50.000 1.51e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02120 - - gmx:100806569 203.756