LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma15g02120	ATGAAGCAGGTTAGGGGTGCAGGGGCAAAGCCCTTGCAGAACACAACCCTTCACTCTCTCGAGCTTCCCTTGACTCTTGCTTTGGCCACTAGCTCACGCCCGCACAAGAGCATCACCCGCTTCCACGACGAGCTCGATGTCGTCCTCGACTGCCACTTCCTTGCCCTGTCACGCGTATTCGTTGGTGGCATCTACATTGGCGCCCTCGTCCCCGCCCTCCTAACCTGCCTCCAACACATCTCTGCCACCGACCTCCGCCACCGCGCCCTCTCCCTCCTCCTCCACCTCTCCCTGGACAACGACGCCAAGGTCAGCCTCGTCGTCGAGGGCTTCCTCTCCCCCGCCGCCCCCTCCGACTGTCGCGCCCTCGCCGCCACCCTCCTCACCAGCCTCGTCGTCCTCCACGTTAACAAGGCCACCATCGGAGCCTTCCCGGGCTCCATCCACGCCCTCGTGACACTTCTCCACGACATATAG	477	0.6331	MKQVRGAGAKPLQNTTLHSLELPLTLALATSSRPHKSITRFHDELDVVLDCHFLALSRVFVGGIYIGALVPALLTCLQHISATDLRHRALSLLLHLSLDNDAKVSLVVEGFLSPAAPSDCRALAATLLTSLVVLHVNKATIGAFPGSIHALVTLLHDI	158

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma15g02120	158	PANTHER	U BOX DOMAIN-CONTAINING	66	156	-	-
	Gma15g02120	158	SUPERFAMILY	ARM repeat	69	157	IPR016024	-
	Gma15g02120	158	PANTHER	RING-TYPE E3 UBIQUITIN TRANSFERASE	66	156	-	-
	Gma15g02120	158	Gene3D	-	64	157	IPR011989	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma15g02120	Gma-Chr15	42638337	42641746	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma15g02120	70	156	U-box Gene Family	AT4G21350	50.000	1.51e-12	62.4

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma15g02120	-		-	gmx:100806569	203.756

Showing 1 to 1 of 1 entries