Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02107 ATGAACATGTTTCCGATGAATCGCATCAGAACAATGATGAAGGGCGAAGATCCTGATATGCGTGTTTCTCAGGAAGCAATGTTGGCCATCAACAACGCTGTGGAGAAGTTCCTTGAGCAATTCACGCAGGAAGCTTATGCTTTTTGTGTTCGGGACCGCAAGAAATGCCTCAACTACGATCATCGAGGAAAGACATTGAAGGATGCCCAAGGAGATGTATTTTGTGGTTTAGAGGTGGTGGAACATGCTTGTGGGATGGCAACTCTGCAAATGGGGGAGTATGTTTCCAATGTATCGCATGGGATTGATACTTACAGCATTAGAGAACCACTTGGTGTTTGTGTTGAGCAAGATATTGTGAATGCTATTTGTGATGACGACGACATCAAAGCCATATCCTTTGTTGGTTCAAATTTTGCCGAAATGCACATATATTCAAGAGCAGCAGCTAAAGGGAAACGCGTTCAGTCTAACATGGGAGCCAAAAATCATGTGATTGTCATGCCAGATGCAAATGTTGATTCTACTCTTAATGCTTTAGTTGCTACTGGTTTTGGTGTTGTTGGACAAAGGTGTATGGCTCTCAGCACAATTGTTTTTGTTGGAGGCTCAAAACCATGGTTGGCATCAAGGCATCGTTTGCTGGTGATCTCAACTTCTATAGCAAGGCAGGGGTTAACTTCTATACACAGATTAAGACAATAA 705 0.427 MNMFPMNRIRTMMKGEDPDMRVSQEAMLAINNAVEKFLEQFTQEAYAFCVRDRKKCLNYDHRGKTLKDAQGDVFCGLEVVEHACGMATLQMGEYVSNVSHGIDTYSIREPLGVCVEQDIVNAICDDDDIKAISFVGSNFAEMHIYSRAAAKGKRVQSNMGAKNHVIVMPDANVDSTLNALVATGFGVVGQRCMALSTIVFVGGSKPWLASRHRLLVISTSIARQGLTSIHRLRQ 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02107 234 Pfam Aldehyde dehydrogenase family 117 199 IPR015590 GO:0016491
Gma15g02107 234 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 165 200 IPR016163 GO:0016620
Gma15g02107 234 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 4 61 IPR003958 -
Gma15g02107 234 SUPERFAMILY ALDH-like 60 203 IPR016161 GO:0016491
Gma15g02107 234 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 57 115 - -
Gma15g02107 234 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 117 208 IPR010061 GO:0004491
Gma15g02107 234 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 57 115 IPR010061 GO:0004491
Gma15g02107 234 Gene3D Histone, subunit A 1 79 IPR009072 GO:0046982
Gma15g02107 234 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 117 164 IPR016162 GO:0016491
Gma15g02107 234 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 117 208 - -
Gma15g02107 234 SUPERFAMILY Histone-fold 3 61 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02107 Gma-Chr15 42266883 42270937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02107 118 218 Aldehyde Dehydrogenase Gene Family AT2G14170 69.231 1.80e-37 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02107 K00140 - cpap:110821132 181.03