Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02089 ATGCTTTCTCTGGGGAGATATGTGATGTTTGATGTTGTTTTTAGTAGAGGTTCAGAACTCACTCAGTTGAACTTTTGCGGCTTTTATATTGTGGTTCTGGAAAGGGATGGGGAAGTGGTTTCTGTTGTCACTATAAGGATTTTTGGCAAGAGGGTTGTGGAAATACCCTTTGTGGCTACCAAGAAGCAATGCAGAAGACAAGGAATGTGTGACATCTTAATGAATGAGATTGAGAAGCTACTGACTTATTTGGGAGTAAAGGAGATTGTTTTGCCTCCCTCGCGTGATGTAATACACACTTGGACAAATTCATTTGGCTTTGTAAGGATGGCACCTTCACATAAGTTTCAGTATATTGAGAATGTTTTTTTGCACTTTGATGCATCATGTGCCACAAAACATTGA 405 0.3951 MLSLGRYVMFDVVFSRGSELTQLNFCGFYIVVLERDGEVVSVVTIRIFGKRVVEIPFVATKKQCRRQGMCDILMNEIEKLLTYLGVKEIVLPPSRDVIHTWTNSFGFVRMAPSHKFQYIENVFLHFDASCATKH 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02089 134 PANTHER DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED 5 127 - -
Gma15g02089 134 Gene3D - 13 127 - -
Gma15g02089 134 Pfam Acetyltransferase (GNAT) family 23 107 IPR000182 GO:0016407
Gma15g02089 134 CDD NAT_SF 30 91 - -
Gma15g02089 134 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 5 127 - -
Gma15g02089 134 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 129 IPR000182 GO:0016407
Gma15g02089 134 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 20 129 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02089 Gma-Chr15 39148457 39148861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02089 5 84 PHD Transcription Factor Family AT5G58610 53.750 2.03e-24 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gma15g02089 Acetyltransf_1 2.1e-07 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02089 - - gmx:102668789 175.637