Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02051 ATGTCTACTCCAGCAAGAACTGCCATTAACCAAGAATCATCTGAATTTTCAGTACCACAAGTTTCGGCTTTGAATCCACGAGGCGAGGAGATGCGAGGGTTAATTGTAGACAATGCTTTTGATTCTATGAATTTGGGACACAACAATGCGGATATCATTGATTTCATAGAGTCGTTACTTGAAGAAGATACTTATTTCACAGGGTTAGGTCACAATGTCAACACGAATAATAATGGTGGAGTTTCAAGAGTAGTGCAACCTGCAAATCAAGACTTTATTCAAAATCTTGAAAGGGTTACAATTCAAGAAATAAGGATGGAGCAATCATCAGATTTTATGTGTTCCATATGTCGTGAGGAATTTTCAGTTGGGTCAGTAACAATACGCCTGCCCCACCCTTGCTCTCATTTCTTTCATGAACACTGTATTATAAGGTGGTTCAACAGGAATAATACATGTCCTCTATGTCGTAGGACTATCTATCTATAG 489 0.3845 MSTPARTAINQESSEFSVPQVSALNPRGEEMRGLIVDNAFDSMNLGHNNADIIDFIESLLEEDTYFTGLGHNVNTNNNGGVSRVVQPANQDFIQNLERVTIQEIRMEQSSDFMCSICREEFSVGSVTIRLPHPCSHFFHEHCIIRWFNRNNTCPLCRRTIYL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02051 162 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 57 158 - -
Gma15g02051 162 ProSiteProfiles Zinc finger RING-type profile. 114 157 IPR001841 -
Gma15g02051 162 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 161 IPR013083 -
Gma15g02051 162 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 57 158 - -
Gma15g02051 162 Pfam Ring finger domain 113 157 IPR001841 -
Gma15g02051 162 SUPERFAMILY RING/U-box 94 161 - -
Gma15g02051 162 SMART ringv_2 113 157 IPR011016 GO:0008270
Gma15g02051 162 SMART ring_2 114 156 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02051 Gma-Chr15 36976585 36977073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02051 83 157 C3H Transcription Factor Family AT5G01980 41.333 6.30e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02051 - K11982 pvu:PHAVU_007G098000g 90.5077