Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02047 ATGGTAGGTGCTAAATGGAAGTCTGTTACTGCAGAAGAGAATAAGCCTTATGAGGGGATATACCATGCGGGGAAAGAAGCTTATTTGCAGGTGATTGCAAAGGAAAAATGTGAAACTGAGTCAATGAGGTTGTTGGAAGACGAGCAGAAGCAGAGGACTGCGATGGAATTGCTTGAACAGTACATGCAATTCAAACAAGAGGCAGAAAAAGATGGAAAGAAGAACAAGAAAGAGAAGGATCCATTGAAACCAAAGCACCCCATGTCAGCTTATTTGTTTTTCACTAATGATAGGCGAGCAGCTCTTACTGCCAGGAACAAGAATTTGTTGGAGGTTCCAAAAATCACATCTGAAGAGTGGAAAAACATGGCAGAAGAACAAAAAAGACCATATGAAGAGATGGCAAAGAAAAATAAGGAGCAATATGCCTTACAAATGGAAGCTTATAAACAGAAGAAAGATGAGGAGGCTGGCCATTTCATGAAGGAAGAGGAGGACCATATGAAACTTCAAAAACAAGAAGCATTGCAACTGCTTAAGAAGAAGGAGAAAACTGAAAATATAATCAAGATAATTGTTTTGGAAGATACAAAAGAGTACATTAGTTATGTCTCAAAGGAAGAGGCTAAAACTCAAGATAGAAGACTTGCTGATCTTTTGCATAAACCAAAGAGGGTGGAGAGTGTCAATGCTGATGCCAAATCCTTTGGTGATCACTGGGAAAGTTCAAATTGCTCTACGCATTCTAAAGTTGAACCACTAGAACATATGAAGAAAAGAGATAGAGGCCGTCAAACTGTGTCATTGGAGAATAAGACAGGAGATTCAATTGTGGTCAAGATAAGTGAGAAAAATAATAATGCTGATGCCGGCGACTGCATGATTCTTCATGACCATGAAGGAGAAGAGCATTGTTGTGGCAAAGGAACAAATGCGAGGAGTGTTTCTTTTTTGCCAAGAAGCCAAGAGAAGAAAGGAGATTCGGCTAAAGTTGTGATAAAACAAGACATGAAGGGAGGAGAGCATAAATATGGGTTTAACAACAATAAATGTGAGAAGGCAGAGAAGGTAAGGGTGGTGGATGATGAAACTGGCGACAAACATGAGTTGTATGAAGTCCTAAGGATGCCATCTAGATGTGTAAAAACTGATGCCTCATGTTTTTTACTGAGGGCAGGAGGGGTATTATAA 1191 0.3963 MVGAKWKSVTAEENKPYEGIYHAGKEAYLQVIAKEKCETESMRLLEDEQKQRTAMELLEQYMQFKQEAEKDGKKNKKEKDPLKPKHPMSAYLFFTNDRRAALTARNKNLLEVPKITSEEWKNMAEEQKRPYEEMAKKNKEQYALQMEAYKQKKDEEAGHFMKEEEDHMKLQKQEALQLLKKKEKTENIIKIIVLEDTKEYISYVSKEEAKTQDRRLADLLHKPKRVESVNADAKSFGDHWESSNCSTHSKVEPLEHMKKRDRGRQTVSLENKTGDSIVVKISEKNNNADAGDCMILHDHEGEEHCCGKGTNARSVSFLPRSQEKKGDSAKVVIKQDMKGGEHKYGFNNNKCEKAEKVRVVDDETGDKHELYEVLRMPSRCVKTDASCFLLRAGGVL 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02047 396 Gene3D High mobility group box domain 67 160 IPR036910 -
Gma15g02047 396 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 84 150 IPR009071 -
Gma15g02047 396 CDD HMGB-UBF_HMG-box 84 147 - -
Gma15g02047 396 PANTHER HIGH MOBILITY GROUP B PROTEIN 13 1 199 IPR044601 GO:0003677
Gma15g02047 396 Coils Coil 132 152 - -
Gma15g02047 396 SUPERFAMILY HMG-box 71 155 IPR036910 -
Gma15g02047 396 Coils Coil 161 181 - -
Gma15g02047 396 MobiDBLite consensus disorder prediction 62 87 - -
Gma15g02047 396 SMART hmgende2 83 151 IPR009071 -
Gma15g02047 396 Pfam HMG-box domain 82 149 IPR009071 -
Gma15g02047 396 MobiDBLite consensus disorder prediction 63 85 - -
Gma15g02047 396 PANTHER HIGH MOBILITY GROUP B PROTEIN 13 1 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02047 Gma-Chr15 36654617 36658207 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Gma15g02047 HMG_box_2 1.9e-14 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02047 K09273 - gmx:100781995 297.36