Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02040 ATGAAGCTTATGGTACTGAAACTCCTAGCTTTCGTGTTCCTTTGGTTGTGGTGGAGTACTTGTATTCATGTTAAAGCAGAAAATGATCGTTTAAAGCCTGGTGATTCACTGAATTTTTCACAATCACTAATTTCTAAAAGCGGCAAATATTCAACAATAATTTTTCGTATTCTTGATGAGGATGAATATCACTTAGGAATACAGTCAAAAGATAAAAATTTTGATTGGGTCGAAATTAGAAAACCTTTTAGCAAGGATTATGAATTTCTATCACTAAACACCTCTGGCGTGCTGAAAATAGAATCTCGATACGGGAAAAAACCAATAATCCTTTATTCTCCACCTCAAGCTATCAATAACACTATGGCCATCTTGTTGGACACAGGGAACTTTGTTCTTCAACAACTTCACCCCAATGGGACAAACACTTTGTTGTGGCAGAGTTTTGATTATCCCAGCACTTTGATCCCCACCATGAAGCTAGGTGTTAATCACAAAACAGGCCATCAATGGGTACTGGTTTCATCTTTGACTGATTTAGTTTTGAATCCCGGTGCCTTTAGTCTTGAATGGGAACCCAAGGGACAAGAACTGGTCATAAGGAGACGCGGAAAAGTTTGTTGGCAAAGTGGGAAACTGAGAAACAATAGATTTGAGTACATTCCGGAGGAAGCACAACGCATGTTGAAGTATACTATTGTGTCTAATGGGGATGAAGACTCTTTCTCTTTCAACTCTACGAATGACAAGCTTACACCACGGTGGTCTTTTAGTAGAAGTGGGCGGTTATCTTGCAACGAAGGATATGTAAAGGCGGATCTGTGTTATGGATATAACAACACTGGAGGGTGCCAAAGATGGCAAGATTTACCAAAGTGTAGGAATCCTGGCGATTTGTTTGTGAAAAAGACTCTTTTCCCCGATTATGAAAATGTAACTTTTGAAATGAATCCGGCTTTTGGCTACAGTGATTGTGAGGCCAGTTGCTGGAGCAATTGTAGTTGCGATGGATTCAGTGCATTATGGGTTAATGAAACTGGATGTACATTCTATCATTGGAATTCATCGAAAAATTTTGTTGACACTAGTGTTGCTGGTGTAGAGCTTTACATGCTGGAGAACACAGGCAACATAACCCCGCATAACGGTACAAAAAGGTGGATATGGTTAAGTGCAGTAATAGCAACTACTTTACTAATAATATTCCTGTCCATTCTGTGCCTATTGAAGAAACGAAAATATTTGGGTCAAGAGAAGAAACGGAAAGAAATGGTGATGAAGATGCCACATTCTACAATTTGTGATGGGTTATCTTCAATCGAAGATTTTGGAAATGTTTTCAAAAAGGGACACGAGTTAAATGTATTTGATTATACATTAGTTATGATGGCTACAAATGGGTTTTCATCTGAAAATAAGTTAGGACAGGGAGGCTTTGGACCCGTTTACAAGGGAATTCTGCCAACAGGGCAGGAGGTTGCTGTAAAAAGACTTTCAAAAACTTCTACACAAGGAATTATGGAGTTTAAAAATGAACTAACACTTATATGTGAACTTCAGCACATGAATCTCGTACAACTACTTGGTTGTTGCATTCATGAAGAAGAGAAGATTCTAATTTACGAATATATGCCCAACAAAAGCTTGGATTTCTATCTATTCGATAGTAGTAGAAGCAAATTACTAGATTGGAATAAGCGCTTCAACATAATAGAAGGAATTGCTCAGGGATTACTTTATCTTCACAAGTactcaagactcaaagtcgttcacagagatttgaaagctagt 1791 0.3719 MKLMVLKLLAFVFLWLWWSTCIHVKAENDRLKPGDSLNFSQSLISKSGKYSTIIFRILDEDEYHLGIQSKDKNFDWVEIRKPFSKDYEFLSLNTSGVLKIESRYGKKPIILYSPPQAINNTMAILLDTGNFVLQQLHPNGTNTLLWQSFDYPSTLIPTMKLGVNHKTGHQWVLVSSLTDLVLNPGAFSLEWEPKGQELVIRRRGKVCWQSGKLRNNRFEYIPEEAQRMLKYTIVSNGDEDSFSFNSTNDKLTPRWSFSRSGRLSCNEGYVKADLCYGYNNTGGCQRWQDLPKCRNPGDLFVKKTLFPDYENVTFEMNPAFGYSDCEASCWSNCSCDGFSALWVNETGCTFYHWNSSKNFVDTSVAGVELYMLENTGNITPHNGTKRWIWLSAVIATTLLIIFLSILCLLKKRKYLGQEKKRKEMVMKMPHSTICDGLSSIEDFGNVFKKGHELNVFDYTLVMMATNGFSSENKLGQGGFGPVYKGILPTGQEVAVKRLSKTSTQGIMEFKNELTLICELQHMNLVQLLGCCIHEEEKILIYEYMPNKSLDFYLFDSSRSKLLDWNKRFNIIEGIAQGLLYLHKYSRLKVVHRDLKAS 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02040 597 Pfam PAN-like domain 299 352 IPR003609 -
Gma15g02040 597 SUPERFAMILY Protein kinase-like (PK-like) 450 597 IPR011009 -
Gma15g02040 597 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 212 IPR036426 -
Gma15g02040 597 Pfam D-mannose binding lectin 76 175 IPR001480 -
Gma15g02040 597 Gene3D Phosphorylase Kinase; domain 1 438 543 - -
Gma15g02040 597 Gene3D Transferase(Phosphotransferase) domain 1 544 597 - -
Gma15g02040 597 Pfam Protein tyrosine and serine/threonine kinase 471 596 IPR001245 GO:0004672|GO:0006468
Gma15g02040 597 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 597 - -
Gma15g02040 597 ProSiteProfiles Protein kinase domain profile. 468 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02040 597 Gene3D - 22 150 IPR036426 -
Gma15g02040 597 SMART tyrkin_6 468 597 IPR020635 GO:0004713|GO:0006468
Gma15g02040 597 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 9 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02040 Gma-Chr15 36139322 36148338 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02040 456 597 Receptor kinase-like Gene Family AT4G04570 64.085 1.23e-56 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma15g02040 PK_Tyr_Ser-Thr 8.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02040 - - gmx:100778030 974.926