Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02029 ATGGAATCACCGTTCAAACCAGAGATTCTGAAGGGGAAGGTTGCTCTAATCACTGGTGGAGCCTCCGGAATCGGATTCGAAATTTCCACCCAATTCGGTAAACATGGAGCCTCTGTTGCGCTCATGGGTCGCCGCAAACAAGTCCTTCAGTCCGCTGTCTCCGTTCTCCAATCCCTCGTCATTCCCGCTGTTGGGTTTGAGGGGGATGTACGGAAGCAAGAGGATGCCGCAAGGGTGGTGGAATCCACGTTCAAGCATTTTGGAAGGATTGATATACTCGTCAATGCTGCAGCTGGGAACTTTCTCGTTTCTGCAGAGGATTTGTCCTCAAATGGCTTTCGAACAGTTCTGGACATCGATTCTGTTGGCACATTCACAATGTGCCATGAAGCACTAAAATATCTCAAGAAAGGGGGAGAAGGAAGGAGCAACTCTTCTAGTGGGGGATCAATAATAAACATTAGTGCTACCTTGCATTACACAGCTTCTTGGTATCAAATTCACGTGTCTGCAGCAAAGGCAGCTGTTGATGCCACTACAAGAAACTTGGCACTAGAATGGGGAACAGACTATGATATTAGAGTCAATGGGATTGCACCAGGTCCAATAAGTGGCACTCCTGGCATGAGTAAACTGGCTCCTGACGAAATAAGTAGCAAAGCCAGAGATTACATGCCACTGTATAAACTTGGGGAGAAATGGGATATTGCCATGGCTGCACTTTTTCTAGCATCAGATGCAGGAAAATTCGTTAATGGCGACACTATGATTGTTGACGGAGGACTTTGGCTGAGTCGGCCTCGCCATTTAGAGAAAGAGGCTGTGAAGCAGGTATCTCGATCAGTAGAAAAGAGATCCAGAAATGTTCCAGTTGGTGTTCCAAAAAGCAAGCTGTGA 897 0.4682 MESPFKPEILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLQSAVSVLQSLVIPAVGFEGDVRKQEDAARVVESTFKHFGRIDILVNAAAGNFLVSAEDLSSNGFRTVLDIDSVGTFTMCHEALKYLKKGGEGRSNSSSGGSIINISATLHYTASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEISSKARDYMPLYKLGEKWDIAMAALFLASDAGKFVNGDTMIVDGGLWLSRPRHLEKEAVKQVSRSVEKRSRNVPVGVPKSKL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02029 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 264 IPR036291 -
Gma15g02029 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 IPR002347 -
Gma15g02029 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 IPR002347 -
Gma15g02029 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 IPR002347 -
Gma15g02029 298 Gene3D - 1 268 - -
Gma15g02029 298 PANTHER PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE 1 291 IPR045017 GO:0008670|GO:0009062
Gma15g02029 298 MobiDBLite consensus disorder prediction 276 298 - -
Gma15g02029 298 CDD TER_DECR_SDR_a 10 264 - -
Gma15g02029 298 PANTHER BNAA05G26380D PROTEIN 1 291 - -
Gma15g02029 298 Pfam Enoyl-(Acyl carrier protein) reductase 19 262 - -
Gma15g02029 298 PRINTS Glucose/ribitol dehydrogenase family signature 14 31 IPR002347 -
Gma15g02029 298 PRINTS Glucose/ribitol dehydrogenase family signature 88 99 IPR002347 -
Gma15g02029 298 PRINTS Glucose/ribitol dehydrogenase family signature 143 159 IPR002347 -
Gma15g02029 298 PRINTS Glucose/ribitol dehydrogenase family signature 169 188 IPR002347 -
Gma15g02029 298 PRINTS Glucose/ribitol dehydrogenase family signature 191 208 IPR002347 -
Gma15g02029 298 PRINTS Glucose/ribitol dehydrogenase family signature 226 246 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02029 Gma-Chr15 34939256 34947760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02029 1 298 Acyl Lipid Metabolism Gene Families AT3G12800 80.537 7.54e-169 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02029 K13237 - gmx:100793630 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g02029 15 34939256 34947760 Gma15g02029 15 34939256 34947760 ECH