Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02028 ATGTCTCCATTGAGAGCTTTAGGGAAGAAGAGAGAAAAGATATCTGGGAGAGGAAGGGGAAAAACCTATGTGAATGAGGCACAAAGAAAGAAGGAAAAATACCTTTGGGTTTCAACTTTTGTTGTGAGACAGCCTAATAGTATCTTGAGACCAGCGTTCCCTCCCATCGTTCCCCCCGACCCCCTCGCCCTCCTCGGCTTTAGCGCTAACACCACCGCCCGCCTCCTCCTCCACTGCTGGGAGCTCGACCCCGCCGTCATCCAAGTTGCCCGCGAGTACTTCAACCTCGCCCGCCTCGAGAGGGACAACCAAAACCGCCTCTTCATCTACTTCGGCGATGCCCTCAACGCCACTATCCCCAACATCTCCAGGGCTTCCTCATCTTCAATGCTGTCGGCGGTGGCACCGGTTCCGGTTTCAACCGCAGTCATGGAGCCCTACAACAACGTCTTCTCCACCCTCTCCCTTTTGGAACACACCGACTTGGCTGTTCTCTTGGACAACGAAGCCATCTATGACAATAACGGAGCCATATCAGAGCTGTTACCGGCCAATCCTGATATTTTAGAGGGTGTTGAAGATCTTATACAACTCAGTTATTTGAATGAGCCCTCAGTTCTGCATAATCTTCAGTCTATATATTCTCATGATATGATTTACAGTAAATCAGGGCCAACTTTAATTGCACTCAATCCTTTTAAAGATGTTCAAATTTATGGAGATGATTATATTTCAGCTTATAGGCAGAAACTTATGGATAGGCCTCATGTTTATGCTATGGCAGATGCAGCATATAATGAGATGATGAGAGTATACTTGTTAATAATCGCTGTTAGAATTTTTTTTTACAGTGGTGAGAGTGGATCTGGGAAAACAGAGACAGCAAAAATTGTTATGCAATACTTAGCTGCTCTTGGTGGTGGCTGTTCTGGAATAGAAAATGAAGTTCTCTTGACAAACTTTATACTAGAAGCTTTTGGGAATGCAAAAACATCTAAGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCACAATGGGGAAAATTTGTGGGGCAAAAATTCAAACTTCTGTAACAAATGCTGCTTTGGTAATGGGTTGCAGTTCCCATGAGCTAATGGAAGCATTATCTACCCATAAAATCCAAGCTGGCAAGGATACCATTACCAAGACATTGACCTTGTGGCAGGCAATTGATGCAAGACATGCATTAGCAAAATTTATCTATGCAAGCTTGTTTGATTGGCTTATAGAACAAGTTAATAAGTCACTTGAAGTGGGTAAACGCCGCACTGGGAGATCCATAAGTATCCTTGATATTTATGGGTTTGAGTCATTCCAGAATAACAACTTTGAACAATTTTGTATAAACTATGCCAATGAGAGGCTTCAACAAAATTTCAATTGGCATCTGTTTAAACTTGAGCAGGAGGTCATCAACTATGTTAAGCTTTAA 1470 0.4279 MSPLRALGKKREKISGRGRGKTYVNEAQRKKEKYLWVSTFVVRQPNSILRPAFPPIVPPDPLALLGFSANTTARLLLHCWELDPAVIQVAREYFNLARLERDNQNRLFIYFGDALNATIPNISRASSSSMLSAVAPVPVSTAVMEPYNNVFSTLSLLEHTDLAVLLDNEAIYDNNGAISELLPANPDILEGVEDLIQLSYLNEPSVLHNLQSIYSHDMIYSKSGPTLIALNPFKDVQIYGDDYISAYRQKLMDRPHVYAMADAAYNEMMRVYLLIIAVRIFFYSGESGSGKTETAKIVMQYLAALGGGCSGIENEVLLTNFILEAFGNAKTSKNDNSSRFGKLIEIHFSTMGKICGAKIQTSVTNAALVMGCSSHELMEALSTHKIQAGKDTITKTLTLWQAIDARHALAKFIYASLFDWLIEQVNKSLEVGKRRTGRSISILDIYGFESFQNNNFEQFCINYANERLQQNFNWHLFKLEQEVINYVKL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02028 489 PANTHER MYOSIN 362 482 - -
Gma15g02028 489 PANTHER MYOSIN 177 361 - -
Gma15g02028 489 Gene3D Myosin VI head, motor domain, U50 subdomain 363 433 - -
Gma15g02028 489 SMART MYSc_2a 184 489 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma15g02028 489 MobiDBLite consensus disorder prediction 1 20 - -
Gma15g02028 489 Pfam Myosin head (motor domain) 192 361 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma15g02028 489 Gene3D Kinesin motor domain 189 361 IPR036961 -
Gma15g02028 489 Gene3D Kinesin motor domain 434 448 IPR036961 -
Gma15g02028 489 SUPERFAMILY Tubulin nucleotide-binding domain-like 132 175 IPR036525 -
Gma15g02028 489 PANTHER MYOSIN-2 ISOFORM X1 177 361 - -
Gma15g02028 489 ProSiteProfiles Myosin motor domain profile. 190 489 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma15g02028 489 Gene3D - 449 483 - -
Gma15g02028 489 PANTHER MYOSIN-2 ISOFORM X1 362 482 - -
Gma15g02028 489 Gene3D Vaccinia Virus protein VP39 41 124 IPR029063 -
Gma15g02028 489 PRINTS Myosin heavy chain signature 220 239 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma15g02028 489 PRINTS Myosin heavy chain signature 321 348 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma15g02028 489 PRINTS Myosin heavy chain signature 278 303 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma15g02028 489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 483 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02028 Gma-Chr15 34923996 34928709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02028 362 482 Myosins gene family AT5G54280 74.380 3.23e-54 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02028 K10357 - gmx:100813861 503.827