Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02024 ATGCGAGCAGGGTTCAAGTACTTGCTCACGTACTTGGTCTCTCAGGGAGAATCTGTTTCTTCCATTGTTGATATCTTCGGCATTGACGAACAGAACATTCTTGAAGCCAACGAGCTTTCTGCTACCTCCATTATTTTCTATTTCACACCGATTTCGGTTCCTTTGAAAACAGAGCCACCGGTTGGAATACAAAGAGCAACGACCCCCCCGGAGGATTCCCCGTTGCCACCACCGCGTCCTGCTCCGGCGGAGGACAGAGATTCCGACTCTTCCAAGAAATGGGTTATTGTTGGAATCGTGGTTGGAGTTGTTGTGTTGCTTATTTTAAGTGCTGCTCTGTTTCTTCTCCGTTTCTATCAACTGCGACAGGTGGAACACCCGTCGCTGCCGCCGCCAAAGGCTTTCTCGGGTTCTGCCACCATGAAGGCGACTATTCCGATGATGCACTCTTGGTCTGTTTCTTCTGAAGGGGTTCGTTACGCGATTAAGTCGTTGAGTGTGTTCGAGTTTGAGGAGTTGCAAAAGGCAACGGGGTTCTTCGGTGAAGAGAACAAGATCAAGGGTTCTGTTTATAGGGCTTCTTTCAAGGGTGATTATGCTGCGGTTGAAGTTCTCAAAGGTGACACCTATCTTGTGTACAGGTTCGCGGAGAATGATTCTCTTGAAGATTGGCTTCACAGTGTTAACAAGAAGTATGAGAATTCCGTGCCTTTGAGTTGGGTGCAAAGAGTTCATATTGCTCATGATGTTGCTGACGCGCTTAACTACCTTCATAACTATACAAGTCCTCCTCATGTGCACAAGAATTTGAAGAGTGGGAGCGTGCTTTTGGATAGGAATTTTAGGGCTAAATTTTCAAACTTTGGGTTGGCAAGAGCTGTGGAGGATCAAGGGGGTGATGGGGGGATTCAATTGACAAAGCATGTGGTGGGGACTCAAGGGTACATGCCACCTGAATACATTGAGAATTGTTTGATTACTCCAAAGATGGATGTTTTTGCGTTTGGGGGTGTGCTTTTGGAGCTTCTTTCAGGGAATGTTAAAGAGAAACTTGGGGGTTTCATGGATCCAGATTTGAGATATGAGTATCCTTTGGAACTGGCTTATTCCATGGCAGAACATGCCAAACGCTGTGTTGCAAGGCCACAGATTTCTGAAGTTTTCATGATTTTGTCCAATATTCAATACTCCACGTTGGATTGGGATCCATCTGACGAGCTTGAATGGTCTAGATCTGTTAGCCAAATCTCTGACCGTAGATAG 1263 0.46 MRAGFKYLLTYLVSQGESVSSIVDIFGIDEQNILEANELSATSIIFYFTPISVPLKTEPPVGIQRATTPPEDSPLPPPRPAPAEDRDSDSSKKWVIVGIVVGVVVLLILSAALFLLRFYQLRQVEHPSLPPPKAFSGSATMKATIPMMHSWSVSSEGVRYAIKSLSVFEFEELQKATGFFGEENKIKGSVYRASFKGDYAAVEVLKGDTYLVYRFAENDSLEDWLHSVNKKYENSVPLSWVQRVHIAHDVADALNYLHNYTSPPHVHKNLKSGSVLLDRNFRAKFSNFGLARAVEDQGGDGGIQLTKHVVGTQGYMPPEYIENCLITPKMDVFAFGGVLLELLSGNVKEKLGGFMDPDLRYEYPLELAYSMAEHAKRCVARPQISEVFMILSNIQYSTLDWDPSDELEWSRSVSQISDRR 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02024 420 SUPERFAMILY Protein kinase-like (PK-like) 158 400 IPR011009 -
Gma15g02024 420 PANTHER PROTEIN LYK5 3 409 - -
Gma15g02024 420 Gene3D Transferase(Phosphotransferase) domain 1 150 414 - -
Gma15g02024 420 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 3 409 - -
Gma15g02024 420 Pfam Protein kinase domain 206 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02024 420 MobiDBLite consensus disorder prediction 59 88 - -
Gma15g02024 420 ProSiteProfiles Protein kinase domain profile. 130 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02024 420 ProSiteProfiles LysM domain profile. 9 53 IPR018392 -
Gma15g02024 420 SMART LysM_2 10 54 IPR018392 -
Gma15g02024 420 CDD LysM 10 46 IPR018392 -
Gma15g02024 420 Pfam LysM domain 11 53 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02024 Gma-Chr15 34468218 34469564 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02024 3 413 Receptor kinase-like Gene Family AT2G33580 44.016 4.74e-112 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gma15g02024 Pkinase 3.5e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02024 - - gmx:100818534 596.66