Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g02001 ATGACGGTGACTGGTGCAACCGGTGGACGTGGAGGGTTGGAAGCTGCAATGGGGCTAAGGTTTCAAACCAAAAACATGAGACGTGAGACTAATAATAGTAAACTGAAAGTGGTCTGTGTGATCTTCAAATTTCCTATGTATCACAGGGTTTTAGTATACGAATATTTACCAACAGGAAGCTTGGAGAATCAATTATTTAGAAGATTCTCGGCATCACTTTCATGGTCAATGAGAATGAAAATTGTTGTTGGAGCTGTGAAAGGTTTAGCATTTCTTCATGAAGCTGAGAAGCCAGTCATCTATAGAGATTTCAAAGCTTCCAAAATCTTGTTAGGCTCTCATGGGAAGTCGCAGGAGAACCGGGACACGGTGATGTACACCATCACATCCGACCACACGGCGCTAGGCATGACCCAAGCCCTTCACACCGGCGAGCACCTCCGCTGCGTGATGGATAGCAACGACTACTCCCCTGACTAG 480 0.4583 MTVTGATGGRGGLEAAMGLRFQTKNMRRETNNSKLKVVCVIFKFPMYHRVLVYEYLPTGSLENQLFRRFSASLSWSMRMKIVVGAVKGLAFLHEAEKPVIYRDFKASKILLGSHGKSQENRDTVMYTITSDHTALGMTQALHTGEHLRCVMDSNDYSPD 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g02001 159 Pfam Protein tyrosine and serine/threonine kinase 37 114 IPR001245 GO:0004672|GO:0006468
Gma15g02001 159 SUPERFAMILY Protein kinase-like (PK-like) 43 115 IPR011009 -
Gma15g02001 159 ProSiteProfiles Protein kinase domain profile. 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g02001 159 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 38 114 - -
Gma15g02001 159 PANTHER OS01G0588500 PROTEIN-RELATED 38 114 - -
Gma15g02001 159 Gene3D Transferase(Phosphotransferase) domain 1 15 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g02001 Gma-Chr15 33364022 33369489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g02001 48 114 Receptor kinase-like Gene Family AT1G56120 54.412 3.01e-16 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma15g02001 PK_Tyr_Ser-Thr 7.9e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g02001 - - gmx:100783759 122.864