Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01988 ATGGGTGAGAAGAGCAACGTTGGCGGCGACGCGATTAACACGACACTGCTTCACGGGAAGTACGAGCTGGGCCGGCTGTTAGGCCACGGAACCTTCGCGAAGGTGTACCACGCGCGCCACCTGAAGACGGGAAAGAGCGTGGCGATGAAGGTGGTGGGCAAAGAGAAGGTGGTGAAGGTAGGCATGATGGAGCAGATCAAGAGAGAGATCTCAGCCATGAACATGGTGAAGCACCCAAACATCGTGCAGCTTCACGAGGTCATGGCGAGCAAGTCCAAGATCTACATCGCCATGGAGCTCGTCCGCGGCGGCGAGCTCTTCAACAAGATCGCCAGAGGCCGTCTCCGGGAGGAGATGGCCAGACTTTACTTCCAACAACTCATCTCTGCTGTGGACTTCTGCCACAGCCGCGGCGTCTACCACCGTGACCTCAAGCCAGAGAACCTTCTCCTCGACGACGACGGCAACCTCAAGGTCACCGACTTCGGCCTCAGCACTTTCTCCGAGCACCTCCGGCACGACGGCCTGCTGCACACTACGTGCGGCACGCCGGCCTATGTCGCGCCCGAGGTGATTGGGAAAAGAGGCTACGACGGCGCCAAGGCCGATATTTGGTCTTGTGGCGTAATCCTCTACGTACTTCTTGCTGGTTTTTTACCCTTCCAGGATGACAACCTGGTGGCCTTGTACAAGAAAATTTACCGCGGTGACTTCAAGTGTCCGCCGTGGTTCTCCTCCGAGGCGCGGAGGCTCATCACCAAGCTCCTCGACCCCAACCCGAACACGCGAATCACAATTTCAAAAATCATGGACTCGTCGTGGTTCAAGAAACCCGTGCCGAAGAACTTGATGGGAAAGAAAAGAGAGGAATTGGATCTGGAGGAGAAGATTAAACAGCATGAGCAGGAGGTTTCTACTACGATGAATGCTTTTCACATCATTTCGCTCTCGGAGGGGTTCGATTTGTCGCCGTTGTTCGAGGAAAAGAAGAGAGAAGAGAAAGAGTTACGGTTTGCGACCACGCGCCCCGCGAGCAGCGTGATTTCGAGATTGGAAGATTTGGCGAAGGCGGTGAAGTTCGACGTGAAGAAGAGCGAGACTAAGGTGAGGTTGCAGGGTCAAGAAAAAGGGCGAAAAGGTAAACTCGCTATTGCTGCGGACTTGTACGCCGTGACGCCGTCGTTTTTGGTGGTGGAGGTTAAGAAGGACAACGGTGACACCTTGGAGTATAACCAGTTCTGTAGCAAGGAGCTTCGTCCAGCTCTTAAAGATATCGTGTGGAGGACTTCTCCTGCAGAGAATCCTACACTCGCTTGA 1317 0.5452 MGEKSNVGGDAINTTLLHGKYELGRLLGHGTFAKVYHARHLKTGKSVAMKVVGKEKVVKVGMMEQIKREISAMNMVKHPNIVQLHEVMASKSKIYIAMELVRGGELFNKIARGRLREEMARLYFQQLISAVDFCHSRGVYHRDLKPENLLLDDDGNLKVTDFGLSTFSEHLRHDGLLHTTCGTPAYVAPEVIGKRGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVALYKKIYRGDFKCPPWFSSEARRLITKLLDPNPNTRITISKIMDSSWFKKPVPKNLMGKKREELDLEEKIKQHEQEVSTTMNAFHIISLSEGFDLSPLFEEKKREEKELRFATTRPASSVISRLEDLAKAVKFDVKKSETKVRLQGQEKGRKGKLAIAADLYAVTPSFLVVEVKKDNGDTLEYNQFCSKELRPALKDIVWRTSPAENPTLA 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01988 438 ProSiteProfiles Protein kinase domain profile. 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01988 438 Pfam Protein kinase domain 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01988 438 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 13 433 - -
Gma15g01988 438 Gene3D Kinase associated domain 1, KA1 302 428 - -
Gma15g01988 438 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Gma15g01988 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Gma15g01988 438 SMART serkin_6 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01988 438 PANTHER - 13 433 - -
Gma15g01988 438 Gene3D Phosphorylase Kinase; domain 1 18 102 - -
Gma15g01988 438 Pfam NAF domain 306 364 IPR004041 GO:0007165
Gma15g01988 438 Gene3D Transferase(Phosphotransferase) domain 1 103 279 - -
Gma15g01988 438 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
Gma15g01988 438 Coils Coil 283 310 - -
Gma15g01988 438 SUPERFAMILY Protein kinase-like (PK-like) 18 285 IPR011009 -
Gma15g01988 438 CDD CIPK_C 309 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01988 Gma-Chr15 32213330 32214646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01988 3 432 CBL-interacting serine-threonine protein kinases AT4G30960 73.409 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma15g01988 Pkinase 7.6e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01988 - K07198 gmx:547644 860.136