Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01985 ATGCAACCCTGTAGCAGAGAAATGCAAGGCCTCAACTCCCTCTTAAACTCTTCCTCCCAAATCTCCCTCCAAGACCTTCAAAATCACACCACTAACCAGATCCAAAATTCACACATGAACCACCAACACCAACTTGCTCACTTTGATTCAACTTCTCACGACGACTTTCTCGAACAAATGCTCTCTTCCTGCTCTTGGACAGACCTCAACCCAAACAAGCCCTTATTATGGGACCCTAACACCCTCAACGACATCAAGCCCCCCGACGAAACGACGCCGTCCAACAACAACAACGACGCTACTACTAATGTCGCATCTTTTTCCTCCTTCGATGAGCACTCCACCTTAGCCTCCAAGTTCCGCAACCACCAGATCAGCTCCAATAACAACGCGCCCAAAAACGCCGCGGCGGCGGCTCTCATGCTCCAACACCAACTCCTCAGAGACTCTGGTCTTCTCAACATGCCTCTTTCCTTGCCCGGAAACGACGTCGTGGTTGACGCTTCTACCTTCGAATCCCCCAATCCGAGTGGTAAAGCTTCAGTCCAAACTCTCTACAACGGGTTCGCCGGATCTCTGCATGGCGTAGGCCAATCCTCGAACCAGACTCAACATTTTCAACACCCTCAGGGAAGTTCGAATCCGATGCAAGGGCAAAATTTTGGGGCGGTGCCAGCTGGTGGTGGTAGCGCGACGAATCAGGCTCCAGCGAGTGGCGCTGCCGCGGGTGGCGCGCCGGCTCAGCCGAGGCAGAGGGTTCGAGCGAGGAGAGGTCAAGCCACGGACCCACACAGCATCGCTGAAAGGTTACGTAGGGAGAGAATCGCCGAGAGAATGAAGGCCCTACAAGAACTGGTTCCCAATGCCAACAAGACAGACAAGGCATCCATGCTAGATGAGATCATCGATTACGTGAAGTTCCTGCAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGATTGGGCGGTGCTGCTGCTGTCGCTCCCCTTGTTGCTGATATGTCCTCTGAGGGAGGCGGAGACTGCATTCAAGCCAACGGCAAGAGTAACGGCGGTGGGGCCCAGGCTTCAACCACCAACACCAACACCAACCAAACGACAGCGACAACAACCTCAAACGATAGCCTAACGATGACGGAGCACCAGGTCGCGAAACTAATGGAAGAAGACATGGGTTCGGCTATGCAGTATCTTCAAGGAAAAGGTCTTTGCCTCATGCCAATTTCACTTGCCACTGCAATCTCCACTGCCACGTGTCCCACCAGGAACGTTAACGTTAACCCCTTGATCAACGCCGCCGCCGGAGCCACCCATTTTCCGACCGCAGCCAACCCCGCCGGCGAAGGGCCGTCGTCTCCGAGCATGTCCGTACTGACGGTGCAGTCCGCCATCGCAGGCAACGACGGCGCCGCCTCCGTTTCGAAGCCGTGA 1428 0.549 MQPCSREMQGLNSLLNSSSQISLQDLQNHTTNQIQNSHMNHQHQLAHFDSTSHDDFLEQMLSSCSWTDLNPNKPLLWDPNTLNDIKPPDETTPSNNNNDATTNVASFSSFDEHSTLASKFRNHQISSNNNAPKNAAAAALMLQHQLLRDSGLLNMPLSLPGNDVVVDASTFESPNPSGKASVQTLYNGFAGSLHGVGQSSNQTQHFQHPQGSSNPMQGQNFGAVPAGGGSATNQAPASGAAAGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEGGGDCIQANGKSNGGGAQASTTNTNTNQTTATTTSNDSLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCPTRNVNVNPLINAAAGATHFPTAANPAGEGPSSPSMSVLTVQSAIAGNDGAASVSKP 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01985 475 PANTHER TRANSCRIPTION FACTOR BHLH69 44 428 - -
Gma15g01985 475 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 44 428 - -
Gma15g01985 475 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 257 319 IPR036638 GO:0046983
Gma15g01985 475 MobiDBLite consensus disorder prediction 348 372 - -
Gma15g01985 475 SMART finulus 265 314 IPR011598 GO:0046983
Gma15g01985 475 MobiDBLite consensus disorder prediction 229 267 - -
Gma15g01985 475 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 259 308 IPR011598 GO:0046983
Gma15g01985 475 Gene3D - 254 316 IPR036638 GO:0046983
Gma15g01985 475 Pfam Helix-loop-helix DNA-binding domain 264 309 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01985 Gma-Chr15 32080443 32084831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01985 235 461 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 66.812 4.11e-87 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma15g01985 HLH 1.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01985 - - gmx:100806899 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01985 15 32080443 32084831 Gma15g01985 15 32080443 32084831 ECH
Gma15g01985 15 32080443 32084831 Gma09g00930 09 16662098 16666320 GST