Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01968 ATGGCCTTCGAAAAGATGAATAACCTCAAAAGACTTATCATAGAAAGTGGTAGCTTTACCACAGGTCCCAATCATCTTCCAAATAGTTTAAGAGTATTAGAATGGTGGGACTATCCTTCACCATCTTTACCAATTGATTTTCATCCAAAGAAACTTGTCAAACTAGAGTTACTCGGTAGTTGCTTAATGTCTCTTGATTTGTTCATGTCAAACAAGATGTTCGTGAATATGAGAGTTTTGAATTTTTCTGATTCTCAAAATATAACAGAGATACCTGACCTATGTGGTGTCCCACGTTTACAAGAATTATCATTTTGCAATTGTGAGAATTTAATTAAAATTCATGAATCAGTTGGATTTCTGGATAAACTTAAAATCTTGTATGCTGATGGCTGCAGCAAGCTTACGAGTTTTCCGCCAATCAAATTGACCTCTCTTGAAGAACTTAAACTTTCATACTGTGGTAGTCTTGAGTGTTTTCCAGAAATATTAGGGAAGATGGAAAATGTAACTTCCCTTGATATTAAAAACACTCCCATAAAAGAATTGCCATCTTCAATTCAAAATCTCACTCAACTTCAAAGGATTAAACTGAAGAATGGTGGAATTATTCAGTTACCAAGTAGCATTTTTGGGATGAAAGAACTTCGTTATTTTATTGTTAAAAAATGTGAGGGGTTGCTTCTATCCAAAGAGAACGAAGGGGAAGCACAAATGACCTCAATGGTCTTTAGAAATCCCATTGATTTTCTTGATCTTTCACATTCCAATATATCAGACGAATTCCTTCTAAGAGGTAGAGGAAATTGCTTGGGACTCTTGATCTTTAAATCTGAACTTGCTGAGGCTTACTCCAAATCATTCAGGGGCAGGGCAGACCCTGATAAAGCATTTGATATCAAAGAGAATGAAGACATGGTTCTAATTTCTGCAGAGCAATTGAGAGTGAAAGACAAGTCTGTAAAAACTATGGCACAAGCTGCACAACAACACTCTCTATTGGAGGAAGAGCTTAAACAAGAAAAGAAAAAGCTCGAGGAATCATCTGAGGGTCAACTAATCTTGGAAGAGCAACTGTTGCAGATGGAATACACCGTACAATATGAAAGAAGTGCAGCATTTGAGGCTCTAGAAGTGCTGGAACAGGAAATAGCCAGTAAAAATGATGAAATATGTCGATTAAATTGTGAAAAGACTTCTGGTGCTGAGGGGGAACGTTTAAAAGAAGCAGCTAACATCAATAAATCATTATCAACCTTGGGTCATGTTATTATGATACTAGTGGATGTGGCAAATGGGAAGCAGAGGCATATCCCTTACAGAGACTCTAGACTAACTTTTCTTCTTCAGGACTCTCTTGGCGGAAACTCGAAAACAATGATCATTGCCAATGTCAGCCCTTCTATCTGGGCTTATTTGCAAGATTCAGTCATAGAGCTGCTAGGAACAGAAAAGTCAAACAATGTGGTGATAGAGCATACTAAAGATGGATCTGGAATAGGAGCTGCTGTATTGGCTGCTTCAAACTCCATGCAATATTTTTATTTTGCAAACACAAGTTACATCAAGGACAGGTTGCGTGAATATGAAGTTGATGTTGATCGTTCTAAAAGACGTGGACCTGAGGTTGAAAGAATTTATTCCGTGATTCTAGAGATGGCATCTGTGACATACATAGATTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACATTCAAGTAGAATAA 1749 0.3739 MAFEKMNNLKRLIIESGSFTTGPNHLPNSLRVLEWWDYPSPSLPIDFHPKKLVKLELLGSCLMSLDLFMSNKMFVNMRVLNFSDSQNITEIPDLCGVPRLQELSFCNCENLIKIHESVGFLDKLKILYADGCSKLTSFPPIKLTSLEELKLSYCGSLECFPEILGKMENVTSLDIKNTPIKELPSSIQNLTQLQRIKLKNGGIIQLPSSIFGMKELRYFIVKKCEGLLLSKENEGEAQMTSMVFRNPIDFLDLSHSNISDEFLLRGRGNCLGLLIFKSELAEAYSKSFRGRADPDKAFDIKENEDMVLISAEQLRVKDKSVKTMAQAAQQHSLLEEELKQEKKKLEESSEGQLILEEQLLQMEYTVQYERSAAFEALEVLEQEIASKNDEICRLNCEKTSGAEGERLKEAANINKSLSTLGHVIMILVDVANGKQRHIPYRDSRLTFLLQDSLGGNSKTMIIANVSPSIWAYLQDSVIELLGTEKSNNVVIEHTKDGSGIGAAVLAASNSMQYFYFANTSYIKDRLREYEVDVDRSKRRGPEVERIYSVILEMASVTYIDSSAVQALKDLYQEYKLRDIQVE 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01968 582 SUPERFAMILY SpoIIaa-like 514 581 IPR036513 -
Gma15g01968 582 SUPERFAMILY L domain-like 2 266 - -
Gma15g01968 582 Pfam STAS domain 514 581 IPR002645 -
Gma15g01968 582 ProSiteProfiles STAS domain profile. 514 582 IPR002645 -
Gma15g01968 582 ProSiteProfiles Kinesin motor domain profile. 398 489 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma15g01968 582 Coils Coil 370 390 - -
Gma15g01968 582 CDD STAS_SulP_like_sulfate_transporter 514 581 - -
Gma15g01968 582 Pfam Kinesin motor domain 397 469 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma15g01968 582 Gene3D Kinesin motor domain 278 489 IPR036961 -
Gma15g01968 582 Gene3D Ribonuclease Inhibitor 165 270 IPR032675 -
Gma15g01968 582 Coils Coil 324 351 - -
Gma15g01968 582 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 398 471 IPR027417 -
Gma15g01968 582 Gene3D STAS domain 509 582 IPR036513 -
Gma15g01968 582 PANTHER KINESIN FAMILY MEMBER 1A 398 472 - -
Gma15g01968 582 SMART kinesin_4 215 497 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma15g01968 582 PANTHER - 398 472 IPR044986 GO:0003777|GO:0008017|GO:1901673
Gma15g01968 582 Gene3D Ribonuclease Inhibitor 1 164 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01968 Gma-Chr15 30909383 30916047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01968 3 260 WRKY Transcription Factor Family AT4G12020 34.307 1.40e-26 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01968 - - gmx:100804616 520.005