Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01962 ATGGAAAGTTCCAAGAACAATAGAGTGGAGAAGAGAGGGTACGAGCTAGTTGAGGAGGGTGATGATGCACAACACCATCTTACACAATCAAAGAAACCAAAACTACCCGGTTTAGCCAGTGTGATTGTGGAAGCTTTAAAGGTGGATAGTATGCAGAGACTTTGCTCATCTTTGGAACCTCTTCTCAGGAAAATTGTCAGTGAAGAAGTGGAGCGTGCTTTGGCAAAATTGGGCCATGCAAAACTGACTGAAAGATCTCCACCACCAAGATTAGAAGGACCAGCGGCAAAGAATCTGCAGCTTCAGTTCAGAACAAGAATGCCACCTCATTTGTTCACTGGTGGAAAGGTTGAGGGAGAACAAGGATCAGCAATCCACGTTATGTTGATGGATCCTAACACAGGCAGTGTCGTTCAAGTTGGACCAGAATCTGTTGCTAAATTGAATGTGGTGGTACTTGAAGGTGACTTTAATGAGGAAGTAGACGATGATTGGACAAAAGAACACTTTGAAAGCCATGAAGTAAAGGAACGTGAGGGGAAAAGGCCACTTCTAACTGGAGATTTGCAGGTTAGCCTAAAGGAAGGGGTAGGAACCTTTGGTGATCTTACTTTCACCGACAATTCTAGCTGGATAAGAAGCAGAAAATTCCGGCTTGGTGTTAAGGTGGCTCCTGGTTATTGTGAGGAGATTCGTATTCGTGAGGGAAAGACTGAAGCCTTCGCTGTTAAAGATCATAGAGGAGAATTGTACAAGAAACACTACCCACCTGCTTTGCATGATGAAGTTTGGAGATTGGATCGGATAGCTAAGGATGGTGCACTTCACAAAAAATTGATTCAGGCAAAAATAGTAACTGTAGAAGATTTCCTACGTCTTCTTGTTCGTGAGCCACAAAAGTTAAGAAGTATACTTGGTAGTGGAATGTCCAATAGAATGTGGGAGAATACTGTGGAGCATGCCAAGACATGTGTCTTGGGTGGCAAGCTCTTTGTATACTACACTGATGAAACCAATAGTGCTGGCATTGTGTTCAACAATATATACGAGCTGAGAGGCCTCATTTCTGATGGCCAATTTTTCTCTTTGGAATCACTTGCTCCAAATCAGAAGATGTCTGTAGATTCCTTGGTGAAGAAAGCATATGAAAATTGGGATCAAGTTGTAGAATATGATGGAAAAGTTTTAAATTCTCTTGCTAATTCGAAAAAGGGATCAAGAGCTGTGGCCACTCAAATAATGCACCATAACAGTTTCCAAGAGCAGCAGTATGCCTCAGCAAAGAACAAGGTGTCATATGTCTCCTCTGAACCAAATCAACATTTGCAAATAACAAATAACTACTCATCCGGTCCCGGTTTGACCGATTATCCATTTGGGAGATCCGACAATCAGATGGTAGGAACGTCTTTAACTGACTCTCAAATAGCATTGCCTGGCAGCATGAATTACATGTCTGGTGAAAATCATGAAATTGGTAGTACTTATTTTTCCGGAGATTGGTCCCGGCCAAGAAATGGACAAGGGTTGGATGACATTGTCGCAGAAGAACTTCGTCTTAGGAGTTCAGAGATGTTGGAGAGTGATGATATGCAGAGGTTACTCAAGACAATTAATGCAGAAGTGAACAGGTCGGCTAATCTTGGTCATTCTAACGAGGGTTGTTACACCTATAGCCTTCAGTATGAGCCTCAGATGTATCAGACATTCAACGAGGATCAGGGAAAGTCTTCAGGGAAGGCTGTTGTTGGGTGGCTTAAGCTCAAAGCTGCTTTAAGGTGGGGCATATTTATCAGGAAAAAAGCTGCAGAAAGGAGAGCACTGCTCACTGAGTTGAATTGA 1842 0.4262 MESSKNNRVEKRGYELVEEGDDAQHHLTQSKKPKLPGLASVIVEALKVDSMQRLCSSLEPLLRKIVSEEVERALAKLGHAKLTERSPPPRLEGPAAKNLQLQFRTRMPPHLFTGGKVEGEQGSAIHVMLMDPNTGSVVQVGPESVAKLNVVVLEGDFNEEVDDDWTKEHFESHEVKEREGKRPLLTGDLQVSLKEGVGTFGDLTFTDNSSWIRSRKFRLGVKVAPGYCEEIRIREGKTEAFAVKDHRGELYKKHYPPALHDEVWRLDRIAKDGALHKKLIQAKIVTVEDFLRLLVREPQKLRSILGSGMSNRMWENTVEHAKTCVLGGKLFVYYTDETNSAGIVFNNIYELRGLISDGQFFSLESLAPNQKMSVDSLVKKAYENWDQVVEYDGKVLNSLANSKKGSRAVATQIMHHNSFQEQQYASAKNKVSYVSSEPNQHLQITNNYSSGPGLTDYPFGRSDNQMVGTSLTDSQIALPGSMNYMSGENHEIGSTYFSGDWSRPRNGQGLDDIVAEELRLRSSEMLESDDMQRLLKTINAEVNRSANLGHSNEGCYTYSLQYEPQMYQTFNEDQGKSSGKAVVGWLKLKAALRWGIFIRKKAAERRALLTELN 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01962 613 MobiDBLite consensus disorder prediction 1 30 - -
Gma15g01962 613 Pfam Calmodulin binding protein C-terminal domain 329 391 IPR046829 -
Gma15g01962 613 Pfam Calmodulin binding protein central domain 258 324 IPR046830 -
Gma15g01962 613 PANTHER OS02G0562300 PROTEIN 9 447 - -
Gma15g01962 613 PANTHER OS02G0562300 PROTEIN 505 612 - -
Gma15g01962 613 Pfam Calmodulin binding protein-like N-terminal domain 99 246 IPR046831 -
Gma15g01962 613 PANTHER OS02G0177800 PROTEIN 505 612 IPR012416 GO:0005516
Gma15g01962 613 PANTHER OS02G0177800 PROTEIN 9 447 IPR012416 GO:0005516
Gma15g01962 613 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01962 Gma-Chr15 29632376 29636206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01962 1 613 Calmodulin-binding Proteins AT2G24300 62.279 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01962 - - gmx:100775528 1222.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01962 15 29632376 29636206 Gma15g01962 15 29632376 29636206 ECH