Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01960 ATGGCTAATGGTTCATTGGATAAATGGATATTCAACAAGAACAAAGAGGAATTTCAGTTGGATTGGGATACAAGGTATAACATAGCACTTGGAATAGCAAAAGGACTTGCTTATCTACATGAAGATTGTGACTCAAACATTATTCATTGTGACATTAAACCAGAAAACGTGCTCCTAGATGATAATTTCAGGGTTAAGGTTTCTAATTTTGGTTTGGCTAAGCTCATGAAACGTGAACAAAGACATGTTTTCACAACACTTAGAGGCACTAGAGGGTATCTTGCACCTGAGTGGATCACAAACTGTGCCATATCAGAGAAAAATGATGTTTATAGCTATGGTATGGTGTTGCTAGAGATCATTGGGGGGAGGAAAAACTATGATCCTAGTGAAACTTCAGAGAAATCCTATTTCCCATTTTTTTCTTTTAAGATGGTGGAAGAAGGGAATGTGACAGAGATTCTTGACTCAAAGGTGGAAACTTATGAAAAAGATCAAAGGGTTCTCATTGTTGTGAATGTTGCATTATGGTGCATACAGGAAGACATGTCTCTTAGGCCTTCGATGACCCAAGTTGTCCAAATGTTAGAGGGTCTATGCACTGTTCATAAGCCACCAACTTCTTTTGTCCTAGGTTCTCGGTTTTATTCAACTAGTGAGGTTGGCACTTATTCaggtgttggatcaagtggcctcggaataattaagaaggggggtttaattaattattaa 732 0.3525 MANGSLDKWIFNKNKEEFQLDWDTRYNIALGIAKGLAYLHEDCDSNIIHCDIKPENVLLDDNFRVKVSNFGLAKLMKREQRHVFTTLRGTRGYLAPEWITNCAISEKNDVYSYGMVLLEIIGGRKNYDPSETSEKSYFPFFSFKMVEEGNVTEILDSKVETYEKDQRVLIVVNVALWCIQEDMSLRPSMTQVVQMLEGLCTVHKPPTSFVLGSRFYSTSEVGTYSGVGSSGLGIIKKGGLINY 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01960 243 Pfam Protein kinase domain 3 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01960 243 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672|GO:0006468
Gma15g01960 243 SUPERFAMILY Protein kinase-like (PK-like) 1 197 IPR011009 -
Gma15g01960 243 Gene3D Transferase(Phosphotransferase) domain 1 1 208 - -
Gma15g01960 243 PIRSF ILK 1 207 - -
Gma15g01960 243 ProSiteProfiles Protein kinase domain profile. 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01960 243 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 227 - -
Gma15g01960 243 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 1 227 - -
Gma15g01960 243 SMART serkin_6 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01960 Gma-Chr15 29444587 29445318 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01960 1 208 Receptor kinase-like Gene Family AT5G20050 47.727 1.39e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma15g01960 Pkinase 1.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01960 - - gmx:100787500 419.468