Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01958 ATGGTCTCCAGAATTACAATTGCCCTTGTTCTTTTTGAATTTCTTCTCTGCCAAGAGTTTGAACCTTTAAAAGCACAAACATGGCTACAAGCTGGTTATTGGTATTCTGGGAGTGGATTTCCTGTTTCAGACATCAACTCTGCTCTTTATACTCACCTGATATGTGCTTTTGCTGAATTGAACTCTTCCACATATGAGCTCTATGTCTCCCCAGAAGATGAGCAATCATTCTCTTCATTCACAACTACTGTCAAACAAAAGAATCCATCCATCACTACACTGCTGTCAATTGCAGGTGGAAATGGTAACGACACTGTCTTATCATTAATGGTAAGCAAAGACTCTTCAAGGAAATATTTCATTCAGTCTTCAATAAGAATAGCCAGGCTTTATGGTTTTCAAGGCCTGGACCTGTCATGGGTTCCTGAAACAATTTCTGACATGAACAACATGGGAAGGCTTTTTGAGGAGTGGAGGGCAGCTGCAAAATCTGAGGCAGCAAACGATAGCACTCAAGTGTTGATCTTAACGGCAGCTGTTCATTTTAGACCAGGTTTGGATTCCGCTTCTTACCCAGTGGAGTCTATTCAAAATAACTTGAATTGGGTACATATTTTGACTTACGACTACCACATGCCTCAGTTGGCAAATTTCACTGCTGCCCATGCAGCCTTATATGATCCTTCAAGTTCTGTAAACACAGACAATGGTATCAAGGAATGGATTGGTAGTGGAGTAACGGCTAGCAAGTTGGTTTTGGGGTTGCCTTTCTATGGATATGCCTGGAATCTTAGGAACCCAGAGGATAATGCAATAGGTGCATCAGCAACAGGTCCAGCAATTGGAAAAAGTGGAGCTATGAACTATAAGGACATCAAGGCTTATATTCAACAATATGGAGGCCATGTCAAGTACAATGCTACTTATGTAGTTAATTACTTCTCCAATGGATCGACTTGGATAGGTTATGATGATGTTGAGGTTGTCAAAATGAAGGTTTCTTATGCAAGGGAAAATAAGTTACTTGGCTATGCTGTGTGGCAAGTTCCTTATGATGACAATTGGGTTCTTTCTAGTGCTGCAGCTGAACATGTTGACCAAAATGGACGCAATAGTTGGCGATTATTAGTGATCATTTTGATCATAACTGCTATGTCTGTTATCCTATTAGGCATCTTAATTTACTACTTAAGGAGGAGATTTCCCAAATCAACAGCAGTAATTTTAAGTACTTTGAACAATGTGAATAAAGACGCTTCAAGACTTTTCCACAGCAACGCACCTGATTTACAAGTATTCAGCTTTTCTGATATTGAGCAGGCCACAGATAGATTCTCAATTGAAAATAAAGTTGGCCAGGGGGGCTATGGTCCTGTTTACAAGGGCATCCTATCAAACCGTCAAGAAGTAGCTGTGAAAAAACTATCAAAAGCCTCTACACAAGGATTTGAAGAATTCAAAAATGAGGTGATGCTAACTGCACGACTCCAGCATGTGAATCTTGTTCGGCTTTTGGGTTTCTACATTGATGGAGAACAACAAATGTTAGTCTACGAGTACATGCCAAACAAAAGCCTGGATTCCTATCTATTTGATCCTATTAGACGGTACCTTCTGGATTGGAGAAAACGCATATACATCATTGAGGGAATTACTCAAGGGCTTCTTTATCTACAAGAATATTCTAGATTGACAATAATCCATAGAGACATAAAAGCTAGCAATATTTTGTTAGACAATGAGATGAAACCAAAAATCTCCGACTTTGGTATGGCAAGAATATTTAGAAAAGACGAACTTGAAGCAAACACTAGTAAAATTGTTGGAACATATGGTTATGTTTCTCCTGAATATGCTATGAAAGGTTTATACTCAACCAAATCCGATGTGTACAGCTTTGGAGTTCTACTTCTACAAATTGTAAGTGGCAGGAGGACAGCATGCTTTTATGGTGAACATGAAAATTTAAACCTCATGGAGTATGCTTATGAGCTATGGAAAGAAGGAAAAGGCATGGAATTTGCTGATCCTTCACTGGATGACTCACATTCGACGTGTAAATTATTGAGGTGCATGCAAATAGCTTTACTATGTGTGCAGGAAGATGCAAATGATAGGCCGACTGTGAAGGAAATTTCTTCAATGTTGAAAAGTGACACTATTCTGATAATTCCCCAAAAGCCAGCGTTTTCCATAAACAGAGATGAGAAGAAACCCAATAAATTTATTATGCATGAAGAAAAATGTTCAATTAATGATGCAACAATATCACAAGTTGTAGCTCGATAG 2289 0.3879 MVSRITIALVLFEFLLCQEFEPLKAQTWLQAGYWYSGSGFPVSDINSALYTHLICAFAELNSSTYELYVSPEDEQSFSSFTTTVKQKNPSITTLLSIAGGNGNDTVLSLMVSKDSSRKYFIQSSIRIARLYGFQGLDLSWVPETISDMNNMGRLFEEWRAAAKSEAANDSTQVLILTAAVHFRPGLDSASYPVESIQNNLNWVHILTYDYHMPQLANFTAAHAALYDPSSSVNTDNGIKEWIGSGVTASKLVLGLPFYGYAWNLRNPEDNAIGASATGPAIGKSGAMNYKDIKAYIQQYGGHVKYNATYVVNYFSNGSTWIGYDDVEVVKMKVSYARENKLLGYAVWQVPYDDNWVLSSAAAEHVDQNGRNSWRLLVIILIITAMSVILLGILIYYLRRRFPKSTAVILSTLNNVNKDASRLFHSNAPDLQVFSFSDIEQATDRFSIENKVGQGGYGPVYKGILSNRQEVAVKKLSKASTQGFEEFKNEVMLTARLQHVNLVRLLGFYIDGEQQMLVYEYMPNKSLDSYLFDPIRRYLLDWRKRIYIIEGITQGLLYLQEYSRLTIIHRDIKASNILLDNEMKPKISDFGMARIFRKDELEANTSKIVGTYGYVSPEYAMKGLYSTKSDVYSFGVLLLQIVSGRRTACFYGEHENLNLMEYAYELWKEGKGMEFADPSLDDSHSTCKLLRCMQIALLCVQEDANDRPTVKEISSMLKSDTILIIPQKPAFSINRDEKKPNKFIMHEEKCSINDATISQVVAR 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01958 762 Gene3D - 257 323 IPR029070 -
Gma15g01958 762 CDD GH18_plant_chitinase_class_V 26 358 - -
Gma15g01958 762 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 19 20 758 - -
Gma15g01958 762 CDD STKc_IRAK 451 717 - -
Gma15g01958 762 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 758 - -
Gma15g01958 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 566 578 IPR008271 GO:0004672|GO:0006468
Gma15g01958 762 SMART serkin_6 445 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01958 762 ProSiteProfiles Protein kinase domain profile. 445 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01958 762 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 368 IPR001223 GO:0005975
Gma15g01958 762 SUPERFAMILY (Trans)glycosidases 31 355 IPR017853 -
Gma15g01958 762 Gene3D Transferase(Phosphotransferase) domain 1 521 723 - -
Gma15g01958 762 SUPERFAMILY Protein kinase-like (PK-like) 429 726 IPR011009 -
Gma15g01958 762 Pfam Glycosyl hydrolases family 18 32 352 IPR001223 GO:0005975
Gma15g01958 762 SMART 2g34 28 352 IPR011583 GO:0008061
Gma15g01958 762 SUPERFAMILY Chitinase insertion domain 258 323 IPR029070 -
Gma15g01958 762 Gene3D Glycosidases 44 350 - -
Gma15g01958 762 Gene3D Phosphorylase Kinase; domain 1 405 520 - -
Gma15g01958 762 Pfam Protein tyrosine and serine/threonine kinase 446 716 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01958 Gma-Chr15 29412041 29417603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01958 433 762 Receptor kinase-like Gene Family AT4G11530 54.006 2.49e-117 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma15g01958 Glyco_hydro_18 2.8e-67 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01958 - - gmx:100787480 1516.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01958 15 29412041 29417603 Gma15g01958 15 29412041 29417603 ECH