Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01953 ATGGCTTTGACAAAGAATATCACATTGAAGAGTTTGGATGTTGAGGCATTTGAGGTGGAGGAGGCAGTGGCAGTGAAGTCGCAGATGATCAAGCACATGATCGAGGACAACTATGTTGACAACAAAGTTCCTCTCCCCAATGCTACTAACAAGATTCTGGCAGAAGTTATCAAGTATTGCAAGAAGCATGTTGATGCCAATTGCACTGATGAGAAGCCTAGTGAGGATGAACTTAAGGCTTGGGAAGCTGATTTCGTCAAGGAGTATGAACAAGATTTTTATTGTGCTTGTGGAACTGCAAGGATCCTTGCTTGGTTACCTTGCCTAAAAGTTACATCTCGTAGACTCCTTCTCCTACATGAGGAGTTACACTATTGGTATAAGTCTATTGTTGCTTATGGGTTCATGCTTCAAGAACATTCTGGAATCAGAGGTGCATCTAGAAAGTCACAGGGAACATGTGCTAGAGTCACCATTGGTCAGGTTCTTTTTCTTATGTGTTGTAAGGAGAACAACAATCATCATGCACAAAAGGCTCTTTGTGGTGCTAAGTTTAAGTTCCCTAGTCGTCAGAAGATCATAGTTAGCTGGTGTCAGACCCTAATTTCATATGGGGGCAATCATTTGCAAACATTTGGATTCTTTCTAGCCGAATTGAGCTGCTTAACACTTGATTTTGCAATCATTTCACCattgaagtcatga 705 0.4071 MALTKNITLKSLDVEAFEVEEAVAVKSQMIKHMIEDNYVDNKVPLPNATNKILAEVIKYCKKHVDANCTDEKPSEDELKAWEADFVKEYEQDFYCACGTARILAWLPCLKVTSRRLLLLHEELHYWYKSIVAYGFMLQEHSGIRGASRKSQGTCARVTIGQVLFLMCCKENNNHHAQKALCGAKFKFPSRQKIIVSWCQTLISYGGNHLQTFGFFLAELSCLTLDFAIISPLKS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01953 234 PANTHER SKP1 1 91 IPR016897 GO:0006511
Gma15g01953 234 SUPERFAMILY Ribosomal protein L16p/L10e 140 197 IPR036920 GO:0003735|GO:0005840|GO:0006412
Gma15g01953 234 Gene3D Potassium Channel Kv1.1; Chain A 2 116 IPR011333 -
Gma15g01953 234 Gene3D Ribosomal protein L10e/L16 136 204 IPR036920 GO:0003735|GO:0005840|GO:0006412
Gma15g01953 234 SMART skp1_3 4 102 IPR001232 GO:0006511
Gma15g01953 234 Pfam Skp1 family, tetramerisation domain 6 64 IPR016073 GO:0006511
Gma15g01953 234 PANTHER PUTATIVE-RELATED 1 91 - -
Gma15g01953 234 SUPERFAMILY POZ domain 6 66 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01953 Gma-Chr15 29187845 29189526 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01953 141 196 Cytoplasmic Ribosomal Protein Gene Family AT1G26910 66.071 2.32e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01953 K03094 - gmx:100790479 166.777