Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01941 ATGGCCTCCGATGATATCTCATTTGAGGACCTCAAGAAGGAGAATATTGATCTTGAAAATATTCCCGTTGAAGAGGTCTTTGAGAAGCTAAAGTGTACCAGAGAGGGTCTGACATCAGCAGAAGGAGAGAAGAGGCTCCAGATTTTTGGCCCCAACAAATTAGAAGAGAAAAAGGATAGCAAGCTCCGAAAGTTCTTAGGTTTTATGTGGAATCCATTATCATGGGTTATGGAATGTGCAGCTATCATGGCCATTGTATTGGCCAATGGAGGGGGCAAGCCACCGGATTGGCAAGATTTCACCGGCATTGTGGTATTGCTTATCATTAACTCAACAATCAGTTTCATTGAGGAAAACAACGCAGGCAATGCAGCAGCCGCTTTGATGGCTGGTCTTGCACCCAAAACCAAGGCAACACACATTTGTTCAGTGTTGAGGGATGGAAAATGGAGTGAGGAAGAGGCAGCAATTTTGGTCCCAGGAGATGTGATCAGCATCAAATTGGGAGTTATTGTCCCTGCTGATGCCCGTCTCTTGGAAGGAGATCCTCTCAAAATTGACCAATCTGCCCTCACTGGTGAGTCCTTGCCAGTCACAAGGAACCCTGGTCAACAAGTCTTCTCTGGTTCCACCTGCAAACAAGGTGAAATTGAGGCTGTTGTCATTGCCACTGGTGTCCACACCTTCTTTGGTAAGGCTGCACACCTTGTAGACAGCACCAACAATGTTGGTCACTTCCAAAAGGTGTTGACATCCATTGGTAACTTTTGTATCTGCTCAATTGCTGTGGGCATGTTGATTGAGCTCGTTGTCATGTACCCTATCCAGAAGAGGTCTTACAGAGATGGTATTGACAACTTGTTGGTGCTTCTCATTGGAGGAATCCCAATTGCCATGCCAACTGTCTTGTCTGTTACCATGGCTATTGGGTCTCACCGCTTGTCCCAACAAGGAGCCATCACGAAGAGGATGACAGCCATAGAAGAAATGGCAGGGATGGATATTCTCTGCAGTGACAAAACTGGAACTCTCACCCTTAACAAGCTTACTGTGGACAAGAGCTTGATTGAGGTGTTCCCCACTGGCATGGACAAGGACACCCTTGTCTTATATGCAGCCAGGGCTTCAAGGACTGAAAACCAAGATGCCATTGATGCATCAATTGTTGGAATGCTAGATGACCGTAAGGAGGCAAGAGCAGGAATCACCGAGGTGCATTTCTTGCCTTTTAATCCTGTGGACAAGCGCACTGCTATTACGTTCATTGACAACAATGGTGACTGGCACAGAAGCAGCAAAGGTGCTCCTGAGGAAATCATTGAACTTTGTGGCCTCAAGGGAGAGACTCTGAAAAAGGCCCACAAGGTTATTGATGAGTTTGCTAACCGTGGTCTGCGTTCCTTAGGTGTTTCTCGCCAGACTGTTTCTGAAAGGACCAAGGAGAGTGCAGGAGATGCATGGGAATTCTTGGGTCTCCTACCCCTCTTTGACCCTCCAAGGCATGATAGTTCTGAGACTATTCGTCGTGCTCTTGAACTTGGTGTCAATGTTAAAATGATCACTGGTGACCAACTTGCCATTGGCAAAGAAACCGGTCGCAGACTTGGAATGGGCACCAATATGTACCCTTCATCCTCCCTCCTTGGTGAATCCAAGGATAATGCCCTTGCAACAATGTCAATTGATGAACTCATTGAGAAGGCTGATGGATTTGCTGGAGTCTTCCCCGAGCATAAGTATGAGATTGTGAAGAGGTTGCAGGATAGAAATCACATTGTTGGAATGACCGGAGATGGTGTGAACGATGCACCAGCATTGAAGAAAGCAGACATTGGCATTGCAGTGGATGATGCAACCGACGCAGCAAGGAGTGCCTCTGACATTGTCTTGACGGAGCCCGGACTCAGTGTGATTGTGAGTGCTGTGTTGACAAGCAGGGCTATCTTCCAGAGGATGAAGAACTACACAATTTATGCTGTTTCTATCACAATCCGTATCGTGTTTGGCTTCATGCTCGTTGCTCTGATCTGGAAGTTCGACTTCTCTCCCTTCATGGTTCTCATCATAGCAATCTTGAACGATGGAACCATCATGACCATCTCAAAGGACAGGGTCAAGCCATCTCCTTTGCCTGACTCATGGAAGCTTAAGGAAATCTTTGCCACTGGAATTGTTCTTGGAGCATACATGGCCATCATAACCGCAGTCTTCTTTTATGTTGTTCATGACACTAGTTTTTTCTCTAACATTTTTGGTGTCAGCCCAATTGCAGAAAGCGAGGAGCAGCTGAACTCTGCTCTCTACCTTCAAGTGAGCATCATTAGTCAGGCACTCATCTTTGTGACCAGGTCACGGAGCTGGTCATACTTTGAACGCCCTGGCATAATGCTCTGTGTAGCCTTCATTTGTGCGCAGCTGGTTGCCACTGTCATTGCTGTGTATGCACATTGGGACTTTGCAAGAATCAATGGAGTTGGATGGAGATGGGCTGGTGTAATCTGGATCTACAGCATTATTACTTATATTCCTCTTGACATCCTCAAGTTTTTAATCCGCATGGGACTCACAGGCAGTGCCTGGGACAACATGCACCAAAACAAGGTTTAG 2607 0.4649 MASDDISFEDLKKENIDLENIPVEEVFEKLKCTREGLTSAEGEKRLQIFGPNKLEEKKDSKLRKFLGFMWNPLSWVMECAAIMAIVLANGGGKPPDWQDFTGIVVLLIINSTISFIEENNAGNAAAALMAGLAPKTKATHICSVLRDGKWSEEEAAILVPGDVISIKLGVIVPADARLLEGDPLKIDQSALTGESLPVTRNPGQQVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQKVLTSIGNFCICSIAVGMLIELVVMYPIQKRSYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDILCSDKTGTLTLNKLTVDKSLIEVFPTGMDKDTLVLYAARASRTENQDAIDASIVGMLDDRKEARAGITEVHFLPFNPVDKRTAITFIDNNGDWHRSSKGAPEEIIELCGLKGETLKKAHKVIDEFANRGLRSLGVSRQTVSERTKESAGDAWEFLGLLPLFDPPRHDSSETIRRALELGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGESKDNALATMSIDELIEKADGFAGVFPEHKYEIVKRLQDRNHIVGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLVALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGAYMAIITAVFFYVVHDTSFFSNIFGVSPIAESEEQLNSALYLQVSIISQALIFVTRSRSWSYFERPGIMLCVAFICAQLVATVIAVYAHWDFARINGVGWRWAGVIWIYSIITYIPLDILKFLIRMGLTGSAWDNMHQNKV 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01941 868 CDD P-type_ATPase_H 36 849 IPR006534 GO:0008553|GO:0016021|GO:0120029
Gma15g01941 868 SUPERFAMILY Calcium ATPase, transduction domain A 141 237 IPR008250 -
Gma15g01941 868 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 36 814 IPR006534 GO:0008553|GO:0016021|GO:0120029
Gma15g01941 868 PRINTS H+-transporting ATPase (proton pump) signature 453 471 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma15g01941 868 PRINTS H+-transporting ATPase (proton pump) signature 568 584 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma15g01941 868 PRINTS H+-transporting ATPase (proton pump) signature 596 612 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma15g01941 868 PRINTS H+-transporting ATPase (proton pump) signature 627 652 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma15g01941 868 PRINTS H+-transporting ATPase (proton pump) signature 768 789 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma15g01941 868 Gene3D - 96 823 - -
Gma15g01941 868 Pfam Cation transporter/ATPase, N-terminus 20 83 IPR004014 -
Gma15g01941 868 SUPERFAMILY HAD-like 333 643 IPR036412 -
Gma15g01941 868 Gene3D - 349 496 IPR023299 GO:0000166
Gma15g01941 868 PANTHER CALCIUM-TRANSPORTING ATPASE 6 867 - -
Gma15g01941 868 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 571 682 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma15g01941 868 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 103 356 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma15g01941 868 ProSitePatterns E1-E2 ATPases phosphorylation site. 339 345 IPR018303 -
Gma15g01941 868 Gene3D - 134 224 - -
Gma15g01941 868 Pfam E1-E2 ATPase 140 316 - -
Gma15g01941 868 Pfam haloacid dehalogenase-like hydrolase 333 610 - -
Gma15g01941 868 SUPERFAMILY Calcium ATPase, transmembrane domain M 16 853 IPR023298 -
Gma15g01941 868 PRINTS P-type cation-transporting ATPase superfamily signature 187 201 - -
Gma15g01941 868 PRINTS P-type cation-transporting ATPase superfamily signature 337 351 - -
Gma15g01941 868 PRINTS P-type cation-transporting ATPase superfamily signature 491 502 - -
Gma15g01941 868 PRINTS P-type cation-transporting ATPase superfamily signature 513 523 - -
Gma15g01941 868 PRINTS P-type cation-transporting ATPase superfamily signature 596 615 - -
Gma15g01941 868 PRINTS P-type cation-transporting ATPase superfamily signature 619 631 - -
Gma15g01941 868 SFLD p-type atpase 319 648 IPR044492 -
Gma15g01941 868 Gene3D - 334 633 IPR023214 -
Gma15g01941 868 SFLD Haloacid Dehalogenase 319 648 - -
Gma15g01941 868 PANTHER PLASMA MEMBRANE ATPASE 6 867 - -
Gma15g01941 868 SMART Cation_ATPase_N_a_2 17 89 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01941 Gma-Chr15 28262700 28269277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01941 5 867 Primary Pumps ATPases AT3G42640 83.430 0.0 1454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01941 K01535 - gmx:100798717 1531.92