Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01933 ATGGAGATTTTCAAATGCTTCTACATCAAAAATCTTATTCTTGTTACCTTCTTCATGGTATCATCAGCAGTTCTAGCAATTGACCCTTACTCAGAGGCACTTCTCAGCCTAAAATCGGAGCTTGTAGATGATGACAACAGCTTGCACAATTGGGTGGTGCCCTCTGGAGGAAAATTAACTGGGAAATCCTATGCATGTTCTTGGTCCGGCATCAAGTGTAACAATGACTCAACAATTGTAACTTCCATAGACCTTTCCATGAAGAAATTGGGAGGTGTGGTTTCAGGGAAGCAATTCATCATCTTCACAAACCTCACTAGTCTCAACCTGAGCCACAATTTCTTCTCTGGGCAGCTCCCAGCTGAGATTTTCAACCTCACCAGCTTAACAAGCTTGGACATCAGCAGAAACAACTTTTCTGGTCCCTTCCCAGGTGGAATTCCTAGACTCCAAAACTTGGTTGTGCTTGATGCCTTTAGCAACAGTTTTTCTGGGCCATTGCCTGCAGAATTTTCACAGCTTGAAAACCTTAAGGTTCTCAATCTAGCTGGGAGCTACTTCAGAGGTTCAATTCCACCTGAATATGGTTCTTTCAAGAGCCTTGAGTTTCTTCATCTTGCAGGAAATTCTCTAACAGGAAGCATACCTCCAGAACTTGGTCACCTCAAAACAGTGACCCACATGGAGATTGGCTACAACGAATACCAGGGTTTTATTCCTCCTGAATTAGGTAACATGAGTCAGCTTCAGTATCTTGACATTGCAGGAGCAAATCTTTCTGGTCCTATACCGAAGCAACTCTCCAACCTCACCAGTTTGCAATCCATTTTCCTCTTCAGAAACCAGCTCACAGGATCAATACCAAGTGAGCTTAGCATCATAGAACCTCTCACAGATTTAGATCTCTCTGATAACTTCCTTATAGGGTCCATTCCTCAAAGCTTCTCAGAGCTAGAGAACCTGAGGCTGCTCAGTGTCATGTACAATGACATGAGTGGCACTGTTCCTGAAAGCATTGCAAAACTTCCATCCTTGGAAACCCTTCTCATTTGGAACAACCGCTTCTCCGGCTCGCTTCCACCGAGCTTAGGCAGGAACTCCAAACTCAAGTGGGTGGATGCCTCTACAAATGATTTAGTTGGAAGCATACCACCAGACATTTGTGCGAGTGGAGAACTGTTTAAGCTGATCCTGTTTTCAAACAAATTCACAGGTGGCCTTTCATCAATCTCCAATTGTTCTTCCCTCGTTCGCCTTCGCCTCGAAGATAACTCATTCTCAGGAGAAATCACTTTGAAATTCAGCCATCTTCCTGATATCTTATATGTTGATCTGTCCAAGAACAACTTTGTTGGTGGGATTCCCTCAGATATTTCTCAAGCCACCCAACTGGAGTATTTCAATGTCTCTTATAATCCGCAATTAGGAGGCATCATCCCTTCCCAAACATGGTCATTGCCCCAACTTCAGAATTTTTCAGCATCTTCTTGTGGTATTTCTAGTGATCTTCCCCTATTTGAATCCTGCAAATCAATTTCAGTTATTGATCTAGATAGCAATAGCTTATCTGGAACCATCCCAAACGGTGTTTCCAAATGTCAAGCTCTTGAGAAAATCAACCTATCCAACAATAATCTGACAGGTCATATACCTGATGAGCTTGCCTCTATTCCTGTTCTTGGTGTAGTGGACCTATCAAACAACAAGTTCAATGGCCCCATACCAGCCAAGTTTGGTAGTTCTTCAAATTTACAACTCCTCAATGTGTCTTTCAACAATATCTCTGGTTCAATACCAACAGCAAAGTCATTCAAATTGATGGGAAGAAGTGCATTTGTTGGAAATTCAGAGCTATGTGGAGCACCATTGCAACCATGTCCTGATTCAGTTGGAATATTGGGAAGCAAAGGCACGTGGAAGGTTACACGTATTGTGCTTCTCTCTGTAGGGTTGTTAATAGTCCTTCTGGGACTTGTTTTTGGAATTCTTTACTTGAGAAGGGGAATCAAAAGTCAATGGAAGATGGTCTCATTCGCTGGTCTACCTCAATTCACAGCAAACGATATTTTGACAAGCCTCAGTGCCACAACAAAACCTACAGATATTCAATCACCATCAGTTACAAAGACTGTTCTGCCTACAGGAATAACAGTTTTGGTCAAGAAGATTGAATTGGAAGCAAGAAGCATAAAGGTTGTGTCAGAATTTATAATGAGGCTAGGAAATGCAAGGCACAAGAACTTAATCAGATTGTTGGGGTTCTGCCACAACCAGCACCTAGTCTATCTTTTGTATGATTACTTGCCCAATGGGAATTTGGCTGAGAAAATGGAAATGAAATGGGATTGGGCAGCAAAATTCAGAACAGTGGTTGGAATTGCAAGGGGACTTTGCTTCCTTCACCATGAATGTTACCCAGCTATACCCCATGGAGACTTGAGGCCTAGCAACATTGTATTCGATGAAAATATGGAACCCCATTTGGCAGAATTTGGGTTCAAACATGTGTCGAGGTGGAGCAAAGGCTCATCACCCACCACAACTAAGTGGGAAACAGAATACAATGAAGCCACAAAAGAGGAACTGAGCATGGATATCTACAAATTTGGGGAGATGATTCTGGAAATTTTAACCAGGGAAAGGTTGGCAAATTCAGGAGCCAGCATACACAGCAAACCATGGGAGGTTCTCTTAAGAGAAATTTACAATGAGAATGGAGCAAGTTCGGCAAGTTCATTGCAAGAGATTAAACTTGTTCTTGAGGTAGCAATGCTTTGCACCCGAAGCAGGTCATCTGACCGGCCATCCATGGAAGATGTTCTTAAGCTTCTGTCAGGGTTAAAACATCTAGAGGATGGCAGAACTTCGAAAGAAGGGCAATAA 2883 0.4253 MEIFKCFYIKNLILVTFFMVSSAVLAIDPYSEALLSLKSELVDDDNSLHNWVVPSGGKLTGKSYACSWSGIKCNNDSTIVTSIDLSMKKLGGVVSGKQFIIFTNLTSLNLSHNFFSGQLPAEIFNLTSLTSLDISRNNFSGPFPGGIPRLQNLVVLDAFSNSFSGPLPAEFSQLENLKVLNLAGSYFRGSIPPEYGSFKSLEFLHLAGNSLTGSIPPELGHLKTVTHMEIGYNEYQGFIPPELGNMSQLQYLDIAGANLSGPIPKQLSNLTSLQSIFLFRNQLTGSIPSELSIIEPLTDLDLSDNFLIGSIPQSFSELENLRLLSVMYNDMSGTVPESIAKLPSLETLLIWNNRFSGSLPPSLGRNSKLKWVDASTNDLVGSIPPDICASGELFKLILFSNKFTGGLSSISNCSSLVRLRLEDNSFSGEITLKFSHLPDILYVDLSKNNFVGGIPSDISQATQLEYFNVSYNPQLGGIIPSQTWSLPQLQNFSASSCGISSDLPLFESCKSISVIDLDSNSLSGTIPNGVSKCQALEKINLSNNNLTGHIPDELASIPVLGVVDLSNNKFNGPIPAKFGSSSNLQLLNVSFNNISGSIPTAKSFKLMGRSAFVGNSELCGAPLQPCPDSVGILGSKGTWKVTRIVLLSVGLLIVLLGLVFGILYLRRGIKSQWKMVSFAGLPQFTANDILTSLSATTKPTDIQSPSVTKTVLPTGITVLVKKIELEARSIKVVSEFIMRLGNARHKNLIRLLGFCHNQHLVYLLYDYLPNGNLAEKMEMKWDWAAKFRTVVGIARGLCFLHHECYPAIPHGDLRPSNIVFDENMEPHLAEFGFKHVSRWSKGSSPTTTKWETEYNEATKEELSMDIYKFGEMILEILTRERLANSGASIHSKPWEVLLREIYNENGASSASSLQEIKLVLEVAMLCTRSRSSDRPSMEDVLKLLSGLKHLEDGRTSKEGQ 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01933 960 Pfam Leucine rich repeat 297 355 IPR001611 GO:0005515
Gma15g01933 960 Pfam Leucine Rich Repeat 104 123 IPR001611 GO:0005515
Gma15g01933 960 PANTHER UNNAMED PRODUCT 5 949 - -
Gma15g01933 960 SUPERFAMILY L domain-like 298 619 - -
Gma15g01933 960 Gene3D Ribonuclease Inhibitor 297 630 IPR032675 -
Gma15g01933 960 Gene3D Ribonuclease Inhibitor 185 296 IPR032675 -
Gma15g01933 960 SUPERFAMILY Protein kinase-like (PK-like) 707 947 IPR011009 -
Gma15g01933 960 Pfam Protein tyrosine and serine/threonine kinase 714 943 IPR001245 GO:0004672|GO:0006468
Gma15g01933 960 ProSiteProfiles Protein kinase domain profile. 673 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01933 960 SUPERFAMILY RNI-like 82 404 - -
Gma15g01933 960 ProSitePatterns Tyrosine protein kinases specific active-site signature. 808 820 IPR008266 GO:0004672|GO:0006468
Gma15g01933 960 Pfam Leucine rich repeat N-terminal domain 32 74 IPR013210 -
Gma15g01933 960 Gene3D Phosphorylase Kinase; domain 1 693 765 - -
Gma15g01933 960 SMART LRR_typ_2 342 366 IPR003591 -
Gma15g01933 960 SMART LRR_typ_2 102 126 IPR003591 -
Gma15g01933 960 SMART LRR_typ_2 198 222 IPR003591 -
Gma15g01933 960 SMART LRR_typ_2 270 294 IPR003591 -
Gma15g01933 960 Gene3D Ribonuclease Inhibitor 29 184 IPR032675 -
Gma15g01933 960 Gene3D Transferase(Phosphotransferase) domain 1 766 958 - -
Gma15g01933 960 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 5 949 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01933 Gma-Chr15 26927271 26930684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01933 14 945 Receptor kinase-like Gene Family AT5G51350 54.228 0.0 955
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma15g01933 PK_Tyr_Ser-Thr 8.2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01933 - - gmx:100782323 1876.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01933 15 26927271 26930684 Gma15g01933 15 26927271 26930684 ECH