Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01928 ATGAATGAAGATAATATGAAGACAATGCTAATGGTACATAGACTTCTTGCTTATGAGTACATGGCTAATGGTTCATTGGATAAATGGATATTCAACAAGAACAAAGAGGAGTTTGTGTTGGATTGGGATACAAGGTATAACATAGCACTTGGAACAGCAAAAGGACTTGCTTATCTACATGAAGATTGTGAGTCAAACATTATTCATTGTGACATCAAACCAGAAAACGTGCTCCTAGATGATAATTTCAGGGTCAAGGTTTCTGATTTTGGTTTGGCTAAGCTCATGACACATGAACAAAGGCATGTGTTCACAACACTTAGAGGCACTACAGTGTATCTTGCACCTGAGTGA 354 0.3757 MNEDNMKTMLMVHRLLAYEYMANGSLDKWIFNKNKEEFVLDWDTRYNIALGTAKGLAYLHEDCESNIIHCDIKPENVLLDDNFRVKVSDFGLAKLMTHEQRHVFTTLRGTTVYLAPE 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01928 117 SUPERFAMILY Protein kinase-like (PK-like) 13 117 IPR011009 -
Gma15g01928 117 ProSiteProfiles Protein kinase domain profile. 1 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01928 117 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 12 117 - -
Gma15g01928 117 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 12 117 - -
Gma15g01928 117 Pfam Protein kinase domain 13 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01928 117 Gene3D Transferase(Phosphotransferase) domain 1 2 117 - -
Gma15g01928 117 ProSitePatterns Serine/Threonine protein kinases active-site signature. 67 79 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01928 Gma-Chr15 26787574 26787927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01928 14 117 Receptor kinase-like Gene Family AT5G20050 51.376 1.18e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gma15g01928 Pkinase 9.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01928 - - gmx:100790029 215.312