Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01925 ATGAAGCATTTTTCTCTCGTTTCACTTGTATTTTGGTCTATATATGTTCACCTGTTTTCTCTATTAACATTGAACTTACTATGGTTCAACCCAAACATGATTgcctttgcatcaggaaatgatactgattatttggcactgcttaaattccgggaatccatatccagtgacccacttggaatcttgctttcttggaatagttcttctcacttttgtaattggcatggaatcacatgcaatcccatgcatcaaagagttacaaagttagacttgggaggatacaagttgaagggttccatatctccccacataggcaatctctcctacatgagaatcttcaacctcaacaaaaactacttgtatgggaacatcccacaagaattgggacggttgtcacaattgcagaacttctctgtgggaaataactcattggaagggaaaattcctacaaacttgacaggttgcactcatctcaaactcctaaacttatatgggaacaatctgATTGGCAAAATACCGATTACAATTGCCTCACTACCGAAGCTTCAACTTCTGAATGTCGGGAACAATAAGTTAACTGGAGGAATCCCACCATTCATAGGGAATCTTTCTGCTCTACTTTATCTCTCAGTGGAGAGTAATAACATAGAGGGAGATGTTCCACATGAAATGTGCCAGCTAAACAACTTGATAAGGATACGGATGCCTGTCAACAAACTAACTGGAACATTTCCTTCATGTCTTTATAATGTCTCATCTCTCATCGAAATCTCAGCTACAGATAATCAATTTCATGGCTCTCTTCCACCTAACATGTTCCACACCCTCCCAAATCTCCAACGATTTTATGTTGCGCTCAACCAAATCTCAGGTTCAATCCCACCTTCCATCATAAATGTGTCTAAGCTTTCAGTACTTGAGATTAGTGGAAACCAATTCACAGGACAAGTTCCACCTCTAGGGAAGCTACGAGATCTTTTTCACCTAAGGTTGTCTTGGAACAAACTAGGTGACAATTCAGCTAATAATTTGGAGTTTTTAAAATCATTGACAAACTGTAGTAGGTTGGAAATGTTATCCATAGCTGACAATAATTTTGGAGGTCATTTGCCAAATTCTTTGGGCAATTTATCCACCCAACTCAGTCAACTGAATCTTGGAGGTAATCAGATATCAGGAGAAATTCCAGAAACTATAGGAAATTTAATTGGCCTATCTTTCTTAACCATGCAAGATAACCGCATTGATGGGATTATCCCAACCACTTTTGGGAAGTTTCAAAAAATGCAAGTGTTAGATGTAAGTATAAACAAGTTGTTAGGAGAGATAGGAGCCTTCATAGGCAATCTCAGTCAATTGTTTCATTTGGAAATGGGTGAAAATAAGTTAGAAGGAAATATTCCTCCAAGCATAGGAAACTGCCAAAAGTTACAATACTTAAACCTTTCACAAAACAACCTTACAGGAACCATACCGCTAGAGGTTTTTAATCTTTCCTCTTTGACAAACTTGTTGGATTTGTCATACAACTCATTGAGCAGTAGTATACCAGAAGAAGTGGGAAACTTAAAGCATATCAATTTGATAGATGTGTCCGAGAATCATCTGTCTGGTTACATTCCTGGAACCCTCGGAGAATGCACAATGTTGGAGTCCCTTTATTTGAAAGGAAATACTTTACAAGGAATCATACCATCCTCTTTGGCATCACTTAAAGGTCTTCAACGTTTAGACCTGTCACGAAATCACTTGTCTGGATCAATTCCTGATGTTCTGCAAAACATTTCTTTCTTAGAATATTTCAATGTATCTTTTAACATGTTGGAAGGTGAGGTGCCAACTGAAGGTGTCTTTCGAAATGCAAGTGGATTTGTGATGACTGGAAATAGTAATCTTTGTGGAGGTATTTTCGAACTGCATCTGCCACCATGCCCTATCAAAGGTAAGAAACTTGCACAACACCACAAGTTTTGGTTGATAGCAGTGATAGTTAGTGTGGCTGCTTTTCTTCTCATACTTTCGATTATTCTAACTATCTACTGGATGAGAAAAAGAAGTAACAAACTATCTTTGGATTCACCAACAATTGACCAGCTGGctaaagtttcataccaaagcttgcacaatggaactgatggtttctcaacaacaaacttgataggctctggaaattttagctctgtctacaaaggaactcttgagttagaagacaaagttgttgcaataaaggtcctaaaccttcaaaaaaaaggagcacgcaagagtttcattgctgaatgcaatgcccttaaaagtattaaacatcgaaatctggttcagattttaacgtgttgctccagcacagattacaaaggccaagaatttaaagctttgatatttgagtacctgaaaaatgggagcctagaacagtggctgcatccaaggacattaactcctgaaaagccaggaacattgaaccttgaccaaagattaaatatcatgattgatgttgcttctgcaatacattatcttcatcatgaatgtaaggagtcgattattcattgtgatttaaagccgagtaatgtacttcttgatgatgatatgactgctcacgtgagtgattttggcttaacaagacttctttcaactattaatggtgccacttctaagcaaacaagtacaattggaataaaggggactgttggctacattcctccag 2698 0.2376 MKHFSLVSLVFWSIYVHLFSLLTLNLLWFNPNMIAFASGNDTDYLALLKFRESISSDPLGILLSWNSSSHFCNWHGITCNPMHQRVTKLDLGGYKLKGSISPHIGNLSYMRIFNLNKNYLYGNIPQELGRLSQLQNFSVGNNSLEGKIPTNLTGCTHLKLLNLYGNNLIGKIPITIASLPKLQLLNVGNNKLTGGIPPFIGNLSALLYLSVESNNIEGDVPHEMCQLNNLIRIRMPVNKLTGTFPSCLYNVSSLIEISATDNQFHGSLPPNMFHTLPNLQRFYVALNQISGSIPPSIINVSKLSVLEISGNQFTGQVPPLGKLRDLFHLRLSWNKLGDNSANNLEFLKSLTNCSRLEMLSIADNNFGGHLPNSLGNLSTQLSQLNLGGNQISGEIPETIGNLIGLSFLTMQDNRIDGIIPTTFGKFQKMQVLDVSINKLLGEIGAFIGNLSQLFHLEMGENKLEGNIPPSIGNCQKLQYLNLSQNNLTGTIPLEVFNLSSLTNLLDLSYNSLSSSIPEEVGNLKHINLIDVSENHLSGYIPGTLGECTMLESLYLKGNTLQGIIPSSLASLKGLQRLDLSRNHLSGSIPDVLQNISFLEYFNVSFNMLEGEVPTEGVFRNASGFVMTGNSNLCGGIFELHLPPCPIKGKKLAQHHKFWLIAVIVSVAAFLLILSIILTIYWMRKRSNKLSLDSPTIDQLAKVSYQSLHNGTDGFSTTNLIGSGNFSSVYKGTLELEDKVVAIKVLNLQKKGARKSFIAECNALKSIKHRNLVQILTCCSSTDYKGQEFKALIFEYLKNGSLEQWLHPRTLTPEKPGTLNLDQRLNIMIDVASAIHYLHHECKESIIHCDLKPSNVLLDDDMTAHVSDFGLTRLLSTINGATSKQTSTIGIKGTVGYIPP 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01925 899 Pfam Protein kinase domain 716 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01925 899 SMART serkin_6 714 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01925 899 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Gma15g01925 899 Gene3D Transferase(Phosphotransferase) domain 1 796 899 - -
Gma15g01925 899 SUPERFAMILY L domain-like 41 336 - -
Gma15g01925 899 ProSiteProfiles Leucine-rich repeat profile. 476 497 IPR001611 GO:0005515
Gma15g01925 899 SMART LRR_typ_2 402 425 IPR003591 -
Gma15g01925 899 SMART LRR_typ_2 498 523 IPR003591 -
Gma15g01925 899 SMART LRR_typ_2 276 300 IPR003591 -
Gma15g01925 899 SMART LRR_typ_2 571 594 IPR003591 -
Gma15g01925 899 SMART LRR_typ_2 450 474 IPR003591 -
Gma15g01925 899 SMART LRR_typ_2 179 203 IPR003591 -
Gma15g01925 899 ProSitePatterns Protein kinases ATP-binding region signature. 720 743 IPR017441 GO:0005524
Gma15g01925 899 Gene3D Ribonuclease Inhibitor 338 652 IPR032675 -
Gma15g01925 899 Gene3D Ribonuclease Inhibitor 40 195 IPR032675 -
Gma15g01925 899 ProSiteProfiles Protein kinase domain profile. 714 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01925 899 Pfam Leucine rich repeat 550 608 IPR001611 GO:0005515
Gma15g01925 899 Gene3D Phosphorylase Kinase; domain 1 695 795 - -
Gma15g01925 899 Pfam Leucine Rich repeat 473 489 IPR001611 GO:0005515
Gma15g01925 899 SUPERFAMILY Protein kinase-like (PK-like) 688 899 IPR011009 -
Gma15g01925 899 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Gma15g01925 899 PANTHER OS04G0122200 PROTEIN 28 898 - -
Gma15g01925 899 SUPERFAMILY L domain-like 379 634 - -
Gma15g01925 899 PANTHER LRR RECEPTOR-LIKE KINASE 28 898 - -
Gma15g01925 899 Gene3D Ribonuclease Inhibitor 252 322 IPR032675 -
Gma15g01925 899 Gene3D Ribonuclease Inhibitor 196 251 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01925 Gma-Chr15 26553800 26556497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01925 40 899 Receptor kinase-like Gene Family AT3G47570 46.039 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gma15g01925 Pkinase 1.7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01925 - - gmx:100782685 1768.82