Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01916 ATGGCGTTTGAGCAAAACTCCGTTCCAGTGGCTCGGGTGGCGGAGGAGCCTCTCGTTTTACCGGCGACTACCGCGGCGGTTGCTGGCGCGGTGCCGATTTTCTACCCCGCGTCTGTGGCTGATGCTGGCTTGGTCGGAGTGGGGTATGGAAATGTGGCTTCGGTTGGTGGTGGTGGTGCTGCTGCCACGTGGTGTGTTCGCCCTGCTGTGCCTGTTCATAATCATAATCACTCTGTGAATCCTGCTGTTGGGTTCTCTCATGCTCCTAGTTTTACTAATAGGGTTGCTACTGCTGCTGGTGGTAGCAATGGTGTTGATGTTTCGGGTAGTTTTGTGGCTGCTTCTCATGGGTATCCTATGAATTTGGGAAGCAATTGGGTTGCCACGAGTAATGCTAATGGCTTGGATAGTAGTAATAGTAGTAATAGCATTAGCAATATTAATGGTAATGGTAGTGGTCTTCAGGGGAATGTCAAAGCCATTAGCAATGCTAGTGATCATGTTGGTGGTGTTGGGGTTGGTTCCATTTCAAATACCCCGGCAAGCCAGCGGACTGATCCGGTGAGTGAGGAGGGTGGGGATGATTCGGTTTCGGGACAGAAAATGAAGTTGATGTGTAGTTATGGGGGGAAGATTTTGCCGAGGCCTAGTGATGGGATGTTGAGATATGTTGGAGGGCATACGAGGATCATAAGTGTTAGGAGAGATGTGAGTTTTAATGATTTGGTGCAGAAGATGGTTGGTACATTTGGGCAAGCCGTGGTTATCAAATATCAGCTCCCTGATGAGGACCTTGACGCGTTGGTATCGGTGTCCTGCCCTGATGATCTGGAAAATATGATGGAGGAGTATGAGAGATTGATTGAGAGGTGTCCTGATGGGTCTCCCAAATTAAGGGTCTTTCTCTTTTGTGCAGCAGAACTTGATCCTTCTGGTATGGTACAGTTTGTGAATTTAGATGATGGTGGGATGAAATATGTTGAAGCTGTGAATGGAATTACTGATGGGATTGGTGGTAAACTCACAAGGAAAGCGAGTTATACAAGTGCAGCTTCTACCCAGAATTCTGATTTGAGTGGGGTAGATGCTCTTGATAGCTCAAATGCTGCTCGAGGGGATGTCAGTGGGGTACATGTACCTTTGTCTGGCACATTATCACCTGAGGGGATCGTAGTTGCTTCTCGTGATACTGCTGCTGCAAATTCTGTGGTTTCTGAGCCTGGAGTGTCTTACACAGATGCTTCTGTTGTTTCACTGGGCATTCGTGCAGTTAATTCTGGCCCAACTCACACTCCACCTGTCCAGAATGAGGTGGAGTTTGAAAAGTCTGTATCTGTTAATTTTTCTCATCCTCAATTTGGGGTCCAGCAACTTGGTTCGGAAATTCCACCATCTGCACCTTTGCAGACTTTTGTTGATACTCACCAGGAAGTTATGAACCATGCAGATTATGTCCAGCTGCCTCCCCATATGGGATTCCCAAATCCTCAGCTTTTAGGTAAGCCTTGTTCCATCTACTCCCAACAGTTTCATGATAATACTTCTCGTTTTGGGTCCCATCATGTAATCCCTGCAGTGCAAATGACCATGACTCAGCCCTTTTCTCATGCTGGTGTAAGACCAAGTGTTATTCAACCACAAACATTCATGCAACCACAGCAGAACCGTTTGGACCAATATAATGATGATAATACTTCAGGGTTAAGGATTCACCAGCTTCCTGCTGAACAAAGTTACAATGCATATCCGGTTCAAGTCCCTTTTGGAGGTAACTACGGCTGGGTTCATGTTCCTTTGGCAGAGCATGTGATTTTTCCTGATGCATTTGTTCCTCAACAACCAGTGATGATCCCTGAGAAAGTCCAAAGAGTGGAGGACTGTTATATGTGTCAGAAAAAGCTGCCTCATTCACATTCAGATCCTGTGGTTCAGGATCTTCGTAATAGCTGTGCTGGTACAATTCCTGATTCAGTCCCAAGTTTCTATAGTGTCCCTATGGGGGAGAACTCAAGGGCTCAAGCAACAAATATGGTTTTGGTGACTGCACCAATGAAGGAAGACAATATTGAACAAGCAGTTGAGACCAGACCCAAGGTCATTAGCAAATTGGATACTCCAGCTGGAGTACCTTCTACTGACACAACTGGACTTTCTTTGGAGTCTGAAGGTGAGAAGGTTTTTATACAGAAGCTGGATTGGTCTGATCATCCCAGGAATGCTGTTGTCCAGGAAGCAGTTGTAAGAACAGGTGAAAAACAGTCACCAACTGATGGGCTGATGGGAACATCACCGCTGTCTTATCAAGATGATGTTGCCCGCCAGCATATTGTGCCAGTTGAAAACTGGGCTAAAGAGGATGCTCTTGTGGCTAAACCTGTTAATAATGATATACCTTTTGTTGGCGGCACATCTGTTGAAAATTCTGACTGTATGGTTCAACAATGTCCAACAGAATATACCAATGAACTTGCTAGCACTATTTCAAAAGCAGATGCTGTGGAGAATTGGATATCACAGGACCTTCTCAAACCTATTGATGGAAGGCTGGACAACCCGAAGATAGGCAATCCTGAAAATTTTCTAAATAATGATAAATTTGATTACAGCACTCAACATGCTGTAGAGAAGAAAGGGGTGGTTTCAGATAACAACCATGGCAAGTCAAAATTGACCACTGGTGCAAATCAAATTAATATGATGGATATGCTTCCTAGTTCTACAGTGGAATATAATGAAGTTACACAACCCCCTGTTTGGGGCATACCTGGATCAAATCCTCAGTCAAAGAGTGGAAACCTTCACAAGGATGATGCAGTTTTATCTTCAGTTCCCCCATCTGTTAGGCTTGGAGATGTGCAGGATTCTTCAAACTCACTTTTTAGCAATCAAGATCTCTGGAATATACACAGTACCTACTTTCCTCCACCAAGACCTAACAAAGTTGCATTGAAGAAAGAAACTTATTCTAATAAGGACCAGCTCTGTGAGATTCCAGGCAACAGTGGGGAACAAAATTTAGAATCTCGAATAGACAATGGCCTCTACCAGACATTCAAACAGAATTTAACTTTGGAAGAAGCTAAATCTGCCAAGGTCTCATCAGAAGACCGACAACTTCAAGCTGTTGCCGAAGGTTTAGCTGCTTCTGTTCTGCACTCGAGCACTTCTTCAAATCTTGATTTGCATGCCAGGGATGTGTCCCATCATGAAGACACTGGCAATGAAGATGTTCAAAATAATCAAACAGATATACAGCATAATGATAAAACTCAGGATCTCAAAAGCAAGCTTCCAGAGAAGGCAAATTTTGGCTTTCCAGTATCAGATGTTGGAGCTTTGCAGGTTATAAAAAATTGTGACCTTGAAGAGCTGATAGAGCTGGGTTCTGGGACCTTTGGGACTGTATATCATGGAAAATGGAGGGGTACTGATGTTGCAATAAAGCGGATTAATGATAGGTGTTTTGCTGGAAAGCCTTCGGAGCAAGAGCGCCTGAGAGCAGATTTTTGGAATGAGGCAATCAAGCTTGCTGACTTGCATCATCCGAATGTGGTAGCATTCTATGGTGTTGTGCTTGATGGCCCCGGAGGTTCTGTGGCGACAGTAACGGAGTATATGGTTAATGGTTCTCTAAGAAATGCCTTGCAGAAGAATGGGAGGAATCTTGACAAGCGCAAGCGTCTTTTGATTGCAATGGATGTGGCCTTTGGTATGGAGTACCTGCATGGAAAAAATATAGTTCACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGGGATCCGCACCGCCCAATATGCAAGGTTGGTGACTTGGGCCTGTCCAAAGTGAAATGCCAGACTTTGATATCTGGTGGTGTTAGAGGAACTCTACCTTGGATGGCCCCAGAACTGCTGAACGGGAGCAGTAGCCTTGTTTCAGAGAAGGTTGACGTGTTTTCGTTTGGCATTGTCATGTGGGAACTCTTCACGGGAGAAGAGCCATATGCCGATTTGCACTATGGGGCCATCATAGGTGGTATTGTAAACAACACTTTACGACCTCCAGTTCCAGAATTTTGTGATCCAGAATGGAGATTGCTGATGGAGAGGTGCTGGTCATCAGAACCATCCGAAAGACCTTCCTTCACTGAGATTGCTAATGGATTACGTTCCATGGCAACCAAGATCTCTCCCAAAGGACAAAATCAACAGCAGCAACCTGCTGTACCACAAAGTCAAGTGCAGAAATGA 4236 0.4481 MAFEQNSVPVARVAEEPLVLPATTAAVAGAVPIFYPASVADAGLVGVGYGNVASVGGGGAAATWCVRPAVPVHNHNHSVNPAVGFSHAPSFTNRVATAAGGSNGVDVSGSFVAASHGYPMNLGSNWVATSNANGLDSSNSSNSISNINGNGSGLQGNVKAISNASDHVGGVGVGSISNTPASQRTDPVSEEGGDDSVSGQKMKLMCSYGGKILPRPSDGMLRYVGGHTRIISVRRDVSFNDLVQKMVGTFGQAVVIKYQLPDEDLDALVSVSCPDDLENMMEEYERLIERCPDGSPKLRVFLFCAAELDPSGMVQFVNLDDGGMKYVEAVNGITDGIGGKLTRKASYTSAASTQNSDLSGVDALDSSNAARGDVSGVHVPLSGTLSPEGIVVASRDTAAANSVVSEPGVSYTDASVVSLGIRAVNSGPTHTPPVQNEVEFEKSVSVNFSHPQFGVQQLGSEIPPSAPLQTFVDTHQEVMNHADYVQLPPHMGFPNPQLLGKPCSIYSQQFHDNTSRFGSHHVIPAVQMTMTQPFSHAGVRPSVIQPQTFMQPQQNRLDQYNDDNTSGLRIHQLPAEQSYNAYPVQVPFGGNYGWVHVPLAEHVIFPDAFVPQQPVMIPEKVQRVEDCYMCQKKLPHSHSDPVVQDLRNSCAGTIPDSVPSFYSVPMGENSRAQATNMVLVTAPMKEDNIEQAVETRPKVISKLDTPAGVPSTDTTGLSLESEGEKVFIQKLDWSDHPRNAVVQEAVVRTGEKQSPTDGLMGTSPLSYQDDVARQHIVPVENWAKEDALVAKPVNNDIPFVGGTSVENSDCMVQQCPTEYTNELASTISKADAVENWISQDLLKPIDGRLDNPKIGNPENFLNNDKFDYSTQHAVEKKGVVSDNNHGKSKLTTGANQINMMDMLPSSTVEYNEVTQPPVWGIPGSNPQSKSGNLHKDDAVLSSVPPSVRLGDVQDSSNSLFSNQDLWNIHSTYFPPPRPNKVALKKETYSNKDQLCEIPGNSGEQNLESRIDNGLYQTFKQNLTLEEAKSAKVSSEDRQLQAVAEGLAASVLHSSTSSNLDLHARDVSHHEDTGNEDVQNNQTDIQHNDKTQDLKSKLPEKANFGFPVSDVGALQVIKNCDLEELIELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQERLRADFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQKNGRNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELFTGEEPYADLHYGAIIGGIVNNTLRPPVPEFCDPEWRLLMERCWSSEPSERPSFTEIANGLRSMATKISPKGQNQQQQPAVPQSQVQK 1411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01916 1411 MobiDBLite consensus disorder prediction 171 199 - -
Gma15g01916 1411 PANTHER SERINE-THREONINE PROTEIN KINASE 162 891 - -
Gma15g01916 1411 CDD STKc_MAP3K-like 1127 1382 - -
Gma15g01916 1411 MobiDBLite consensus disorder prediction 1067 1091 - -
Gma15g01916 1411 PRINTS Tyrosine kinase catalytic domain signature 1311 1333 IPR001245 GO:0004672|GO:0006468
Gma15g01916 1411 PRINTS Tyrosine kinase catalytic domain signature 1355 1377 IPR001245 GO:0004672|GO:0006468
Gma15g01916 1411 PRINTS Tyrosine kinase catalytic domain signature 1203 1216 IPR001245 GO:0004672|GO:0006468
Gma15g01916 1411 PRINTS Tyrosine kinase catalytic domain signature 1240 1258 IPR001245 GO:0004672|GO:0006468
Gma15g01916 1411 SMART serkin_6 1121 1392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01916 1411 Pfam Protein tyrosine and serine/threonine kinase 1126 1382 IPR001245 GO:0004672|GO:0006468
Gma15g01916 1411 Gene3D Phosphorylase Kinase; domain 1 1114 1208 - -
Gma15g01916 1411 Gene3D Transferase(Phosphotransferase) domain 1 1209 1411 - -
Gma15g01916 1411 ProSiteProfiles Protein kinase domain profile. 1121 1388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01916 1411 Pfam PB1 domain 221 303 IPR000270 GO:0005515
Gma15g01916 1411 Gene3D - 222 304 - -
Gma15g01916 1411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1246 1258 IPR008271 GO:0004672|GO:0006468
Gma15g01916 1411 SUPERFAMILY Protein kinase-like (PK-like) 1115 1382 IPR011009 -
Gma15g01916 1411 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 946 1391 - -
Gma15g01916 1411 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 162 891 - -
Gma15g01916 1411 CDD PB1_UP2 205 303 - -
Gma15g01916 1411 PANTHER SERINE-THREONINE PROTEIN KINASE 946 1391 - -
Gma15g01916 1411 SUPERFAMILY CAD & PB1 domains 217 306 - -
Gma15g01916 1411 MobiDBLite consensus disorder prediction 1388 1411 - -
Gma15g01916 1411 ProSitePatterns Protein kinases ATP-binding region signature. 1127 1158 IPR017441 GO:0005524
Gma15g01916 1411 SMART PB1_new 216 303 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01916 Gma-Chr15 25846426 25857378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01916 137 676 MAP Kinase Kinase Kinase AT3G46920 37.838 1.25e-79 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gma15g01916 PK_Tyr_Ser-Thr 2.7e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01916 - - gmx:100776264 2749.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01916 15 25846426 25857378 Gma15g01916 15 25846426 25857378 ECH
Gma17g00614 17 5179039 5184548 Gma15g01916 15 25846426 25857378 PCT
Gma13g00754 13 21732637 21739126 Gma15g01916 15 25846426 25857378 PCT
Gma17g00987 17 8418746 8426545 Gma15g01916 15 25846426 25857378 PCT
Gma15g01916 15 25846426 25857378 Gma17g00614 17 5179039 5184548 PCT
Gma15g01916 15 25846426 25857378 Gma13g00754 13 21732637 21739126 PCT