Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01894 ATGGCACCTGAGATGATAAAAAAGAAATCTTATGGGAAAAAGGTTGGTGTCTACAGCTTTGGGCTTATGATACGGGAGATGTTGACTGGAAGGATACCATATGAGGATATGAATCCAACACAGGCTGCTTTTGGAGTAGTAAATAAGAAGCTCTTACATTTTGCCGAACTCAAGCACAACTCTATATCTTTCTTCAACATTGAGAAACATGAAACTGTCATTTCCAGTTGGTCTAGAGCTACAACCAGAGCTGCCAAGGTTGGAAATGGTTTATCAAAAGATGACAAAGCTCAAAAACTTGCTTTGCAGCACTAG 315 0.3968 MAPEMIKKKSYGKKVGVYSFGLMIREMLTGRIPYEDMNPTQAAFGVVNKKLLHFAELKHNSISFFNIEKHETVISSWSRATTRAAKVGNGLSKDDKAQKLALQH 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01894 104 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 50 104 IPR044159 -
Gma15g01894 104 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM6 50 104 - -
Gma15g01894 104 Pfam Protein kinase domain 1 57 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01894 104 SUPERFAMILY Protein kinase-like (PK-like) 1 83 IPR011009 -
Gma15g01894 104 ProSiteProfiles Protein kinase domain profile. 1 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01894 104 Gene3D Transferase(Phosphotransferase) domain 1 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01894 Gma-Chr15 24638920 24640057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01894 1 51 MAP Kinase Kinase Kinase AT5G58950 66.667 6.01e-19 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gma15g01894 Pkinase 4.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01894 - - gmx:100779879 103.605