Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01885 ATGTTGAGAGTGAAGGGAGGGAGCAGGCCGCCGTGGGTTGGGCTCGGCGCCGCCGTGTGGGTCCAGATCGCGTCGGGGAACACCTTCACCTTCCCCCTCTACTCCCACTCCTTGAAGTCAGTTCTCGGCTTCGACCAGCGCCATGTCACGCTCCTCGGTGTCGCCATCGACATCGGCGAAAACCTCGGCCTCCTCCCCGGCGTCGCCTGCAACAAGTTGCCCCCTTGGCTCCTCCTCGTCGTCGGCTCCCTCGCCGCCTTCCTCGGCTACGGCCTCCTCTTCCTCGCCATCTCCAAAACTCTTCACTCACTCCCTTACTTACTGCTATGGTTTGCTCTGGTTGTTGCCGCTAACAGTAGTGCGTGGTTAACCACTGCTGTTCTCGTGACCAACATGAGAAACTTCCCTGCTAGCAGAGGCTCTGTTGCGGGGATTCTTAAAGGTTATGGGGGGCTTAGTGCTGCGGTTTTTACTGAGATTTACAGCATTGTGCTTCATAATTCTTCTTCCAAGTTCCTGTTGTTTCTTGCTGTTGGTATTCCTGTTGTTTGCTTCAGCATGATGTTTCTTGTTAGGCCTTGTACTCCTGCCACAGGTGATGACCCTGTAGAGCCTTACCATTTTCTGTTTGTCCAAGGTTCCAGTGTGGTTTTGGGTGTGTACCTTCTTGCAACTACAATAGTGGGTAATATTATTCCGTTTAGTGGTGAGCTTTCATATGCTTTGGTGGCTGTGATGATTCTGCTTCTCATTGCTCCACTTGCTGTCCCTTTGAAGATGACATTGTTTCCTAGGCATGGTTCTAAATCAGACTCGCCCGAGCAACAAGTTGCGTCTTCTGAGGGCAAAGATGAGAATGCTGAGCCACTGCTGGCATCTTCGTCGGCAGGGGCCCTTGGGAGTTTTGATGATCAGGATGATTCGTCTGAGGTGGCTGAGCTTCTTGCTTTGGGTGAGGGAGCAGTGAAGCAGAAGAAGAGAAGAAGGCCTAAACGTGGGGAAGATTTTAAGTTCACTGAGGCTATAGTGAAGGCTGATTTCTGGCTGCTATTTTTTGTCTACTTTGTTGGTGTTGGCACTGGGGTTACTGTTCTCAATAATCTTGCTCAAATAGGTATTGCCCAAGGGGAGGAAGACACTACCACCTTGCTGTCAATTTTCAGTTTCTGCAATTTTGTGGGGCGGCTTAGTGGAGGAGTTGTTTCGGAACATTTTGTCAGGACAAAAACTATCCCAAGGACAGTCTGGATGACGTGCACGCAGACTGTTATGCTCATTGCATACCTTCTGTTTGCCTATGCTATCAATGGAACCCTTTATCCTGCAATTGCATTTCTTGGTGTCTGCTATGGTGTGCAAGTTTCTGTGATGCTCCCAACTGTTTCCGAGCTTTTTGGTTTGAAGCACTTTGGCGTGTTGAGCAGCTTCATGTCGCTGGGGAATCCAATTGGTGCATTCCTCTTTTCAGCTCTGCTAGCAGGGAACATATATGACAATGAGGCAGCAAAACAGCATGGTATAGACCTTCTTCTTGATTCTGGTGTTTCCTGCATCGGTCCAAATTGCTTTAAGCTTACCTTTTTCATTCTTGCTGGAGTGTGTATTGCCGGCATCATCTTTAGTGTTATCCTGACTCTGAGAATTAAGCCTGTTTACCAAATGCTTTATGCTGGAGGCTCTTTCAGGCTACCTCAAACATCTTCAAATCAATGA 1713 0.4886 MLRVKGGSRPPWVGLGAAVWVQIASGNTFTFPLYSHSLKSVLGFDQRHVTLLGVAIDIGENLGLLPGVACNKLPPWLLLVVGSLAAFLGYGLLFLAISKTLHSLPYLLLWFALVVAANSSAWLTTAVLVTNMRNFPASRGSVAGILKGYGGLSAAVFTEIYSIVLHNSSSKFLLFLAVGIPVVCFSMMFLVRPCTPATGDDPVEPYHFLFVQGSSVVLGVYLLATTIVGNIIPFSGELSYALVAVMILLLIAPLAVPLKMTLFPRHGSKSDSPEQQVASSEGKDENAEPLLASSSAGALGSFDDQDDSSEVAELLALGEGAVKQKKRRRPKRGEDFKFTEAIVKADFWLLFFVYFVGVGTGVTVLNNLAQIGIAQGEEDTTTLLSIFSFCNFVGRLSGGVVSEHFVRTKTIPRTVWMTCTQTVMLIAYLLFAYAINGTLYPAIAFLGVCYGVQVSVMLPTVSELFGLKHFGVLSSFMSLGNPIGAFLFSALLAGNIYDNEAAKQHGIDLLLDSGVSCIGPNCFKLTFFILAGVCIAGIIFSVILTLRIKPVYQMLYAGGSFRLPQTSSNQ 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01885 570 Gene3D MFS general substrate transporter like domains 207 546 IPR036259 -
Gma15g01885 570 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 570 - -
Gma15g01885 570 SUPERFAMILY MFS general substrate transporter 16 196 IPR036259 -
Gma15g01885 570 MobiDBLite consensus disorder prediction 268 282 - -
Gma15g01885 570 CDD MFS_Mch1p_like 10 538 - -
Gma15g01885 570 Pfam Nodulin-like 11 258 IPR010658 -
Gma15g01885 570 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 570 - -
Gma15g01885 570 SUPERFAMILY MFS general substrate transporter 221 550 IPR036259 -
Gma15g01885 570 MobiDBLite consensus disorder prediction 266 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01885 Gma-Chr15 24134641 24138498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01885 2 569 Nodulin-like Gene Family AT1G80530 56.294 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01885 - - gmx:100805662 1066.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01885 15 24134641 24138498 Gma15g01885 15 24134641 24138498 ECH
Gma15g01885 15 24134641 24138498 Gma09g00853 09 12602372 12606182 GST
Gma17g01003 17 8569708 8572871 Gma15g01885 15 24134641 24138498 PCT
Gma13g01447 13 29213258 29224467 Gma15g01885 15 24134641 24138498 PCT
Gma15g01885 15 24134641 24138498 Gma17g01003 17 8569708 8572871 PCT
Gma15g01885 15 24134641 24138498 Gma13g01447 13 29213258 29224467 PCT