Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01878 ATGTGCAAGAAAACTAGGATATGGCTAGGAACTTTTGAAACTGTTGAGGATGCAACTAGAGCCTATGATGAAGCAGTAAGGCTAATGTGCTACATGGCTTCTTTGCAAATGACAAGGCCATCAATTCACAGGCAGAGCCTTAGACAGTGGCTTCACCATATGTCATCATCTCCTCTACGATTCAAGCCTCTTGAAGAGGACCACATCGAGCAAATGATAGAGGAGTTGCTGCATTACGGGTCTATTGAGTTATGCTCTGTGATTCCACCACATGCTCTTTGA 282 0.4397 MCKKTRIWLGTFETVEDATRAYDEAVRLMCYMASLQMTRPSIHRQSLRQWLHHMSSSPLRFKPLEEDHIEQMIEELLHYGSIELCSVIPPHAL 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01878 93 ProSiteProfiles AP2/ERF domain profile. 1 40 IPR001471 GO:0003700|GO:0006355
Gma15g01878 93 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 48 87 - -
Gma15g01878 93 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 4 30 - -
Gma15g01878 93 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 48 87 - -
Gma15g01878 93 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 30 - -
Gma15g01878 93 Gene3D AP2/ERF domain 1 35 IPR036955 GO:0003700|GO:0006355
Gma15g01878 93 SUPERFAMILY DNA-binding domain 3 29 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01878 Gma-Chr15 23932524 23933032 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01878 4 93 AP2-EREBP Transcription Factor Family AT5G25190 39.869 1.83e-24 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01878 - - mdm:103440753 104.375