Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01856 ATGATTCTCGTATCAGAAGAAAGTTCAAAGGGTATTGATTCTCGTGTTAGAAGAAAGTTCAAAGGATGCACTTTGATGCCCAACATTGGTTATGGCTCTGACAAGAAAACCTACCATTATCTACCAAATGGTTTCAAGAAATTTGTTGTGCACAATGTGAAAGACCTGGAACTTCTCATGATGCATAACAGGACATACTGTGTCAAGATTGCTCACAATGTATCCACAAGGAAGAGGAAGGACATAGTTGAGAGAGCTGCCCAACTTGATGTTGTTGTtgttgtagtaattctgatccatttttggataatctttaacaatgatgtataa 330 0.3333 MILVSEESSKGIDSRVRRKFKGCTLMPNIGYGSDKKTYHYLPNGFKKFVVHNVKDLELLMMHNRTYCVKIAHNVSTRKRKDIVERAAQLDVVVVVVILIHFWIIFNNDV 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01856 109 SUPERFAMILY Ribosomal protein L32e 10 94 IPR036351 -
Gma15g01856 109 CDD Ribosomal_L32_L32e 10 90 IPR001515 GO:0003735|GO:0005840|GO:0006412
Gma15g01856 109 PANTHER 60S RIBOSOMAL PROTEIN L32-1 5 95 - -
Gma15g01856 109 SMART Ribosomal_L32e_2 10 95 IPR001515 GO:0003735|GO:0005840|GO:0006412
Gma15g01856 109 Pfam Ribosomal protein L32 9 94 IPR001515 GO:0003735|GO:0005840|GO:0006412
Gma15g01856 109 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 5 95 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01856 Gma-Chr15 23092177 23092717 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01856 10 94 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 85.882 2.64e-52 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01856 K02912 - gmx:100499846 164.466