Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01812 ATGGAGCAGTTGAAATTGGCGGCAGATTCTGAAGCCAAAGAGGATAAGTCTTTGGGACACAAGCCAAAAAATAACAATGCCCTTGAGTCTTCTGACAGTCTGAGAAATAAAAAGATATCAGCTCGATGGGATCCGGTTGAAGCATGTCGGCCTATAATTGAAGAAGCACCTGTTTTTTATCCGACTATTGAAGAATTTGAAGACACGCTTAGTTACATAGGAAAGATACGACCCCTAGCTGAACCCCATGGCATATGTAGGATCGTTCCTCCAGCTTGCTGGGCTCCACCCTGTCCTCTTAAGGAGAAAGATCTATGGGAAAATACTGAATTTCCCACTCGTATTCAACAAATTGATTTGCTTCAAAATAGGGAACCTATGAGGAAAAAAAGTAGGGGAAGGAAGCGAAAACGTAGAAAGCACTCCAAAACAGGCACATGTAGGAGGAAGCCTGCCAATGCAGCTTCTGAAGCTAAGAATGCTTCTGAGTCTGAAGAGAAATTCGGATTTCAATCAGGGTCAGACTTCACGCTTAAAGACTTTCAGCAATATGCTAATTTTTTTAAGGAATGCTACTTTGGGTTGAGAGATGCTAATGGAGACAGAATAGTGAGTGAAAGTGACCATCAAAAGAGATGGGAGCCCTCTGAGGAGGAAATTGAAGGTGAATACTGGCGAATAATTGAGCAACCAACTGATGAGGTTGAGGTGTATTATGGAGCTGACTTGGAAACTGGAGCACTTGGAAGTGGTTTTCCCAAGGCCGCATCATTAACTAAGAGTGAGTCAGATCAATATGCCCAGTCTGGCTGGAATCTGAATAATTTTGCCCGACTGCCAGGTTCTGTACTAAGTTATGAAGGAAGTGATATATCAGGAGTTCTAGTGCCATGGCTGTATGTTGGCATGTGTTTTTCATCATTTTGCTGGCATGTTGAGGACCATCACCTCTATTCACTAAACTATTTGCACTGGGGTGACCCAAAAGTATGGTATGGAGTACCTGGAAGCCATGCTGCAGCCTTGGAAAAAGTAATGAGGAAGCACTTGCCTGATTTATTTGAGGAACAACCAAATCTACTCAATGATCTGGTTACCCAGTTTTCTCCTTCAATTCTTAAATCTGAGGGAGTGCCTGTGTATCGCACAGTTCAGCATTCTGGGGAATTTGTTATTACCTTTCCCAGGGCATATCATGCTGGCTTCAATTGTGGCTTCAACTGTGCAGAGGCAGTGAATGTGGCTCCTATTGATTGGTTAATGCATGGACAAAATGCTGTCGAGCTTTACAGGTTACAATGCCGTAAGACATCCTTGTCACATGACAAGCTGTTATTTGGGTCAGCACTGGAAGCTGTACGAGCCCTTGCAGAGCTAGCTCTTGGAAAGGAAACTCCAAAAAGTTTGAAATGGGGAAGTGTTTGTGGGAAAGATGGAGATCTTACCAAGGCAGTTAAGGCAAGGATAAAGATGGAAGAAGAAAGGCTAGACTGTCTTCCAAATCATCTTAAGTTGCTGAAGATGAACAGTGATTTTGATTTGTACAAGGAAAGAGAATGCTTCTCTTGCTTCTATGACTTGCACCTATCAGCTATGGGTTGTGAGTGCTCCCCTGACAGATATTCTTGTCTTAAGCATGCTAATTTGTTCTGCTTGTGTGGATTGGAGAAAAGATTTGTTCTGCTTCGATATACTATAAGTGAACTAAATAAATTGCTTGAAGCATTAGAAGGAGAATCACATGCTATTGAGGTGTGGGCAAATAAAAACTTTGGAATGATTTCTGCCAATGCCAATGAGGTTTGCTTAGATAAACCAGACCTTGAGAAAGACATGTACAAAATCAAGAATTGTGAAGAAATGGAAAGCTCAACTGGCTTTGCAGGAACCAAGGATAGGTCAAATTTAAATGCACCTAGCAGTCCTAATAGTCATATTACTTCAGAGATAGTGCAGTCTGAGGCTCACCCTGTAACTTCAAGTGCAGCATATGAAAGTATAGATAGTCATAATGATAATAATAATGATAAAAAGTTGATCACAGACAACAAAGATAAAGTGGATCAGGCTGGTTCTCTGGATTTGAATCTTGATGTTATCTCTGGTGAAAATGAAAATCATTTGCTGCATATTGCTGGTAAGCATCATAGTAAAGGTGTTTTAGTAGAGGAAAAAGTGTGCTGTTCAGAAACCAAACAGGAAGAAGACAACATGGAACTTTGTGGTGAGGGTAACTTATCAAACTCGTTTTCTGTTCTAAAGACAGATTTTTCATCATGTTCAAGGGGTGTTCGTAATTATTGTACATTTGATGGTGGAAAAATTGAGATGGATCTGCAAATGGATTCTGATTCTGGAAATCAGCACAACAATCTATTTGAAAGGAAAGCCATAGACACCACACATACTAGTATATCTTTGACAGACGAAAGCTGCTTAGTGCAAATGTTTGGTACTTCTGTAAAGCTTGTAAGTTTGGGATCTGCTGTTTATGGAAAGCTCTGGTGCAGTAAGCACACACTATACCCAAAAGGATTCAAGACTCGAGTTAATTTCTTTAGCATTCTTGATCCAACAAGAATCTGTACCTATATTTCTGAAGTCATTGATGCTGGTTTTCTTGGACCTCTTTTCAAGGTTACCATGGAAGAATGTCCAAGTGAGGCTTTCACAGATACCTCAGCAGATAATTGCTGGGAATCAGTTCTGAAGAGATTACATCATGAAATCATGAGGCAAAGGAGTCTAGGTGAACTAGAACTTCCTCTCTTAGAGCTCCTGAAAAGCATTAATGGTCATAGAATGTTTGGCTTCCTTTTACCATCTATTATTCAGGCCATCGAAGCTCAAGATCCCAGCCATCTGTGTGTAGAGTACTGGAATCACAAAGTTGCCCCTTCTGGCAGTGTTGTTGATAACTTCACATATGGTTCCAGTGGTATTATTATCAATACCAAAAATTTTGGTATTGATTTGATTAAGCAGGAAAAAGAGGACATCCTTGAAGAGATGAAATTAATACTGCAAAGGGCAAGTCCTGATGAGTTAAGCACAATGCATAAGTTACTCAGCTCTGATGCACAGTGCTGTGAGTGGAGAGTGGCATTGATAGCGCTGATGGATGAGATCCGAAACGCTCGTCAATAA 3147 0.4071 MEQLKLAADSEAKEDKSLGHKPKNNNALESSDSLRNKKISARWDPVEACRPIIEEAPVFYPTIEEFEDTLSYIGKIRPLAEPHGICRIVPPACWAPPCPLKEKDLWENTEFPTRIQQIDLLQNREPMRKKSRGRKRKRRKHSKTGTCRRKPANAASEAKNASESEEKFGFQSGSDFTLKDFQQYANFFKECYFGLRDANGDRIVSESDHQKRWEPSEEEIEGEYWRIIEQPTDEVEVYYGADLETGALGSGFPKAASLTKSESDQYAQSGWNLNNFARLPGSVLSYEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKVWYGVPGSHAAALEKVMRKHLPDLFEEQPNLLNDLVTQFSPSILKSEGVPVYRTVQHSGEFVITFPRAYHAGFNCGFNCAEAVNVAPIDWLMHGQNAVELYRLQCRKTSLSHDKLLFGSALEAVRALAELALGKETPKSLKWGSVCGKDGDLTKAVKARIKMEEERLDCLPNHLKLLKMNSDFDLYKERECFSCFYDLHLSAMGCECSPDRYSCLKHANLFCLCGLEKRFVLLRYTISELNKLLEALEGESHAIEVWANKNFGMISANANEVCLDKPDLEKDMYKIKNCEEMESSTGFAGTKDRSNLNAPSSPNSHITSEIVQSEAHPVTSSAAYESIDSHNDNNNDKKLITDNKDKVDQAGSLDLNLDVISGENENHLLHIAGKHHSKGVLVEEKVCCSETKQEEDNMELCGEGNLSNSFSVLKTDFSSCSRGVRNYCTFDGGKIEMDLQMDSDSGNQHNNLFERKAIDTTHTSISLTDESCLVQMFGTSVKLVSLGSAVYGKLWCSKHTLYPKGFKTRVNFFSILDPTRICTYISEVIDAGFLGPLFKVTMEECPSEAFTDTSADNCWESVLKRLHHEIMRQRSLGELELPLLELLKSINGHRMFGFLLPSIIQAIEAQDPSHLCVEYWNHKVAPSGSVVDNFTYGSSGIIINTKNFGIDLIKQEKEDILEEMKLILQRASPDELSTMHKLLSSDAQCCEWRVALIALMDEIRNARQ 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01812 1048 Coils Coil 990 1010 - -
Gma15g01812 1048 Gene3D - 816 957 - -
Gma15g01812 1048 MobiDBLite consensus disorder prediction 122 166 - -
Gma15g01812 1048 Pfam F/Y rich C-terminus 875 963 IPR003889 GO:0005634
Gma15g01812 1048 Pfam jmjN domain 57 90 IPR003349 -
Gma15g01812 1048 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 10 1046 - -
Gma15g01812 1048 SMART fyrn_3 827 871 IPR003888 GO:0005634
Gma15g01812 1048 Pfam JmjC domain, hydroxylase 298 414 IPR003347 -
Gma15g01812 1048 MobiDBLite consensus disorder prediction 128 147 - -
Gma15g01812 1048 SUPERFAMILY Clavaminate synthase-like 237 451 - -
Gma15g01812 1048 Pfam F/Y-rich N-terminus 820 868 IPR003888 GO:0005634
Gma15g01812 1048 ProSiteProfiles JmjC domain profile. 268 431 IPR003347 -
Gma15g01812 1048 PANTHER LYSINE-SPECIFIC DEMETHYLASE 10 1046 - -
Gma15g01812 1048 SMART fyrc_3 877 969 IPR003889 GO:0005634
Gma15g01812 1048 ProSiteProfiles JmjN domain profile. 56 97 IPR003349 -
Gma15g01812 1048 ProSiteProfiles FYR domain FYRN motif profile. 813 871 IPR003888 GO:0005634
Gma15g01812 1048 SMART cupin_9 265 431 IPR003347 -
Gma15g01812 1048 ProSiteProfiles FYR domain FYRC motif profile. 873 963 IPR003889 GO:0005634
Gma15g01812 1048 SMART JmjN_1 55 96 IPR003349 -
Gma15g01812 1048 MobiDBLite consensus disorder prediction 1 22 - -
Gma15g01812 1048 MobiDBLite consensus disorder prediction 1 34 - -
Gma15g01812 1048 Gene3D Cupin 41 415 - -
Gma15g01812 1048 MobiDBLite consensus disorder prediction 625 660 - -
Gma15g01812 1048 Pfam C5HC2 zinc finger 520 572 IPR004198 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01812 Gma-Chr15 21500091 21507893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01812 817 993 JUMONJI Transcription Factor Family AT1G30810 51.124 8.12e-51 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Gma15g01812 JmjC 2.4e-47 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01812 - - gmx:100801775 2106.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01812 15 21500091 21507893 Gma09g00775 09 10108059 10117789 GST