Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01801 ATGGAGGCTCGATTAGAGGGGAAAAACCAGTATTTGTATGGACCTGTGGTGCCTGAGGTGAAGAGTGTTGGGAAGAGAACTTTGGAGTGGGATTTGAATGATTGGAAGTGGGATGGGGATCTTTTCACTGCTAGGCAACTTAATTCAGTGCCATCAGATTGCAGGAGCCGTGAGTTGTTCCCTGCTGATCCTGAAATTCTTGTAACTGGTGATGCTTCTAACAATTTGTCTTCTGCATATGATGATGTTAACCTTGGTGAGGGAAAGAGAGAATTGGAGAAGAGGAGGAGAGGTGTTATTGATGAAGGAGGGGTGGAGATGAATGATGGAGCTGGTTCTCTTAATTTGAACCTTGGGGGTCAAGTATACCCTATCATGGAAGGGGAGGAAAAAAGTGGGAAGAAGACAAAGCTGACTGCGAGTACTTCGAGCCGGGCTGTTTGTCAGGTGGAAGATTGTAGGGCTGATCTTAGCAATGTGAAGGATTACCACCGTCGCCACAAAGTTTGTGATATGCATTCTAAGGCTACCCAGGCACTAGTTGGAAATGTTATGCAGAGATTCTGTCAACAGTGTAGCAGGTTTCATGTTCTTCAAGAATTTGATGAAGGGAAGAGAAGCTGTCGTAGGCGTCTGGCTGGCCACAATAAAAGGAGGAGGAAAACGCATCCTGATGCAACTGTAGTTAATGGAGGCTCTCTGAATGAAGAAAAGGGCAGTAGCTATTTGTTAATGAGTCTGCTAAGGATACTGTCCAATATGCATTCAAATGGCTCGGATAATATGAGGAACCAGGATGTTCTATCACATCTGCTGAGGAACCTAGCAAGTCTGACTGGTACAATTAATGGAAGAAATATAGTGTCTTTATTGGAGGGATCTCAAGATTTGGTAAAAGCTGGGACATCTGGAGCTGCACAGAATGTTCCAAACACAAATTCAAATGGTCCTGAACCGTCCCGTCCTTTATATTCTTCTATCAAAATGGATGATGGTCTAATCCATCGGGACCCTCCAGAGTCTTTGGTACAATGTGAGACGACTCCTGCTAATGATATGGCTAAAGAATGTATAGCTTCAGGCAATGATGAAGTAGGAAGTTTAAAATCTCCTTCAGTTCCACTGTCCACAAATGTACTTCTGTCAATGGATAGCCTTCCACCACAATCAATTGCAGCACAGACTACAGTTGGAAGAATTGGGTTAAGTAATATTGACCTGAATAATGTATATGATGATGTACAGGATTATGTTGAGAACACGAGGAATTGTCGTCCTCCTCTGCCTTCAGGAAATGGGTCTCTTGATCATCCTTTATTGGTCCAATGTGACTCTCTCAAGTCAAGTCCACCACAGACAAGTAGAAACTCAGATTCAACCTCTACCCAGTCACCATCTAGTTCTAGTGGAGAAGCTCAGAGTCGCACAGATCGAATTGTTTTCAAACTATTTGGCAAGGCTCCAAATGATTTCCCCCATGCTCTCCGATCACAGATCCTTAACTGGTTATCCCACAGTCCCACAGAGATAGAGAGCTATATAAGGCCAGGTTGTATCATGTTGACTATATATCTCCGCCTAGAAAATTCTGCTTGGGAAGAGCTATGCTACAATCTAGGACCCAGCTTGAGAAAGCTTGCCGCGTCAAATGATTGTTTCTGGAGAACAGGATGGATATATACAAGAGTGCAGCATTCTGTAGCTTTTCTGTATAATGGTCAGGTGGTCTTAGATGCACCATTGCGCCTCAAAAGTCCGCAAAGTTGTCAAATTTTATGCGTTAAACCACTTGCTGTTTCTGCTAGTTCTTGTGCTCAATTTGTTTTGAAAGGATTCAATTTTTTGCTGTCTAACTCGAGGTTGCTCTGTGCACTTGAAGGGAAGTATCTGGTACAAGATAATTGTTATGATTTGATTGACAGTGTTGACGCAGCCAATGGACATCATGAGCTTCAGCATCTCAGATTCTCTTGTCATGTACCGAATGTGACTGGAAGAGGGTTTATCGAGGTGGTGGAAGACAATGGTCTTAGCAGCTGTTCCTTTCCATTCATAGTTGCAGAGCAAGAAATTTGCTCAGAGATCTGTAAGCTGGAGAATGTCATTGAGGCAGCAGAGACTGCTGATGACATCCAAATAAAAACTAAACTAATGGAAGAAAAGACTCAAGCATTGTATTTCATACAAGAAATGGGTTGGCTCCTTCATAGAAGTCGCGTGAAAGTTAGGCTAGGTCCTGTGGCACCTGTCCAAGATAACTTCCATTTTAATCGATTCATGTGGCTTGTTGGCTTCTCTATGGACCATGACTGGTGTGCTGTGATGAAAAAGCTCTTGAACATTGTCTTTGAGGGCACTGTTGATACCGGAGATCATGCCTCTGTTGAGTTAGCTTTGTTAGAGATGGGTCTTCTACACAAAGCAGTAAAAAGAAATTTCCGACCTATGGTTGAACTACTATTAAAATTTGTGCCAGTTAAGGCTTCAGATGGTGGAGACAGTAATGAGAAGCAAATCAACAAGTCCCCTGACAGATTCTTATTCAGACCTGATACTGTTGGGCCTGCCAGGTTGACTCCCCTTCATGTTGCAGCAAGTATGCATGGCTCAGAGAATGTATTGGATGCATTAACTGATGATCCAGGAATGGTGGGAAGTGAGGCATGGAAAAGTGCTCAGGACGCTACAGGTTTGACCCCCTATGACTATGCATCCCTGCGGGGCTACTATTCTTACATTCAACTTGTCCAGAGGAAAACAAGCAACACATGCAAAAACCAACAACACGTGCTTGATATCCCAGGCAACCTTGTAGATAGTAACACAAAGCAGAAGCAATCAGATGGGCACAGATCATCAAAAGTTTTAAGTTTGCAGACTGAGAAAATTGAAACAACCGCAATGCGTCATTGTGGGCTATGCCAGCAAAAGCTGGTGTATGGTGGCATGAGAAGGGCACTGGTTTTCAGGCCAGCAATGCTGTCAATGGTGGCCATTGCAGCTGTGTGTGTCTGTGTAGCTTTGCTCTTCAAAAGCTCACCCAAAGTTTATTATGTATTCCAGCCCTTCAGCTGGGAATCATTGGAGTATGGGTCAATCTAA 3102 0.4346 MEARLEGKNQYLYGPVVPEVKSVGKRTLEWDLNDWKWDGDLFTARQLNSVPSDCRSRELFPADPEILVTGDASNNLSSAYDDVNLGEGKRELEKRRRGVIDEGGVEMNDGAGSLNLNLGGQVYPIMEGEEKSGKKTKLTASTSSRAVCQVEDCRADLSNVKDYHRRHKVCDMHSKATQALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHPDATVVNGGSLNEEKGSSYLLMSLLRILSNMHSNGSDNMRNQDVLSHLLRNLASLTGTINGRNIVSLLEGSQDLVKAGTSGAAQNVPNTNSNGPEPSRPLYSSIKMDDGLIHRDPPESLVQCETTPANDMAKECIASGNDEVGSLKSPSVPLSTNVLLSMDSLPPQSIAAQTTVGRIGLSNIDLNNVYDDVQDYVENTRNCRPPLPSGNGSLDHPLLVQCDSLKSSPPQTSRNSDSTSTQSPSSSSGEAQSRTDRIVFKLFGKAPNDFPHALRSQILNWLSHSPTEIESYIRPGCIMLTIYLRLENSAWEELCYNLGPSLRKLAASNDCFWRTGWIYTRVQHSVAFLYNGQVVLDAPLRLKSPQSCQILCVKPLAVSASSCAQFVLKGFNFLLSNSRLLCALEGKYLVQDNCYDLIDSVDAANGHHELQHLRFSCHVPNVTGRGFIEVVEDNGLSSCSFPFIVAEQEICSEICKLENVIEAAETADDIQIKTKLMEEKTQALYFIQEMGWLLHRSRVKVRLGPVAPVQDNFHFNRFMWLVGFSMDHDWCAVMKKLLNIVFEGTVDTGDHASVELALLEMGLLHKAVKRNFRPMVELLLKFVPVKASDGGDSNEKQINKSPDRFLFRPDTVGPARLTPLHVAASMHGSENVLDALTDDPGMVGSEAWKSAQDATGLTPYDYASLRGYYSYIQLVQRKTSNTCKNQQHVLDIPGNLVDSNTKQKQSDGHRSSKVLSLQTEKIETTAMRHCGLCQQKLVYGGMRRALVFRPAMLSMVAIAAVCVCVALLFKSSPKVYYVFQPFSWESLEYGSI 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01801 1033 MobiDBLite consensus disorder prediction 445 474 - -
Gma15g01801 1033 Pfam SBP domain 148 221 IPR004333 GO:0003677
Gma15g01801 1033 ProSiteProfiles Zinc finger SBP-type profile. 145 222 IPR004333 GO:0003677
Gma15g01801 1033 Gene3D - 139 209 IPR036893 GO:0003677|GO:0005634
Gma15g01801 1033 SUPERFAMILY Ankyrin repeat 804 919 IPR036770 -
Gma15g01801 1033 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 13 1032 IPR044817 GO:0003677
Gma15g01801 1033 MobiDBLite consensus disorder prediction 212 233 - -
Gma15g01801 1033 MobiDBLite consensus disorder prediction 443 474 - -
Gma15g01801 1033 SUPERFAMILY SBT domain 146 227 IPR036893 GO:0003677|GO:0005634
Gma15g01801 1033 PANTHER TRANSCRIPTION FACTOR SBP FAMILY-RELATED 13 1032 - -
Gma15g01801 1033 Gene3D - 775 932 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01801 Gma-Chr15 20992345 21003172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01801 1 1032 SBP-box Gene Family AT3G60030 47.514 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Gma15g01801 SBP 7.6e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01801 - - gmx:100792774 2047.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01801 15 20992345 21003172 Gma15g01801 15 20992345 21003172 ECH
Gma15g01801 15 20992345 21003172 Gma09g00765 09 9808976 9820920 GST
Gma17g00366 17 2989024 2994477 Gma15g01801 15 20992345 21003172 PCT
Gma15g01801 15 20992345 21003172 Gma17g00366 17 2989024 2994477 PCT