Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01791 ATGATTCCGGTAGACGATGTTGGTGAAGCATATCCACGCATTGACCATTCCCCTTGGAATGGATGTGGAGGAGGCGGTGTCAGTGAAGTCACAGACGATCAAGCACATGGTCAAAGACAAATTCCCGACAACGAAATTCCTCTCCCCAATGTTACCAACAAGATTCTAGGGAAGGTTATCGAGTATTGTAAGAAGCACATTGAGGCCAATTGCGCTGATGAAAAGCCCAATGAGGATGAACTCAGGCTTGGGACGTTGATTTCATCAAGGTTGATCAGGCCACTCTTTTCGATCTCATTCTGGGGTTTCACCAAGTTTAGCCGTGCTGATTATCTCAAGTACAAGTCAGAGAGCAAGATTGTGCCTGTTGGTGTGAATGTTAAGGTAATGCAAATCTGCACCAACATGTGGATGAAATTTCATTGCATGTTGTTTTCTTGA 441 0.4444 MIPVDDVGEAYPRIDHSPWNGCGGGGVSEVTDDQAHGQRQIPDNEIPLPNVTNKILGKVIEYCKKHIEANCADEKPNEDELRLGTLISSRLIRPLFSISFWGFTKFSRADYLKYKSESKIVPVGVNVKVMQICTNMWMKFHCMLFS 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01791 146 Gene3D - 106 132 - -
Gma15g01791 146 Gene3D Potassium Channel Kv1.1; Chain A 27 92 IPR011333 -
Gma15g01791 146 Pfam Skp1 family, tetramerisation domain 44 66 IPR016073 GO:0006511
Gma15g01791 146 SUPERFAMILY POZ domain 40 69 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01791 Gma-Chr15 20757923 20759457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01791 101 130 Cytoplasmic Ribosomal Protein Gene Family AT1G26910 63.333 1.45e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01791 K03094 - gmx:100798104 75.8701