Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01790 ATGGCATCTGATCTGAATTCGGGGTTGTCCAAGAAAACATTTGTTTTTGGATTGAAAGTGTGGGTACTAATGGGAATAATAGTTGGGTTATTCATCATAATCATTCTTGTGGTGCTATCAATATGTCTCACTTTAAGAAAGAAGTTCAGAAGAGTCAATGGCAAGCTTCCACTTAGCCATGTGATATCTGTTTCAGATGAGATCAAAGAAATCAAAGTCGATCAAGTTCCAGCAAATAATCATCCACAAAATGGTGTCTTTACGAGTCTGAATGACAAATTTGGTGACAGGGAGTCTGAAAAGGTTTTGAACCAAACAAAGAATGGGGATAATAGTAGTCAATCAGGTTCATCTAATCATTTAGAGAAAGATGCCAATGGCTCTCAATCAGGTGAAGACAGCGGTGTTAAGAGTGTTTCTGCTTACAGATCTTCTTCGCATCCTATAACCGCACCATCCCCTTTGTCTGGTCTGCCTGAATTCTCTCACCTTGGTTGGGGCCACTGGTTTACATTAAGGGACCTGGAACTTGCTACAAACAGGTTTGCAAAAGATAACGTTATTGGTGAAGGTGGGTATGGAATTGTTTATCACGGTCAATTAATCAATGGGAATCCTGTGGCCATTAAGAAGCTCCTCAATAATTTAGGACAAGCTGAAAAGGAATTCAGGGTAGAAGTTGAGGCTATTGGTCATGTGCGGCATAAGAACTTGGTTCGACTTTTGGGATATTGCATTGAAGGCACTCACAGGCTGTTGGTTTATGAGTATGTTAACAATGGCAATTTGGAGCAGTGGCTTCATGGAGCCATGCGACAACATGGCTTTCTTACTTGGGATGCACGGATAAAAATTCTCCTTGGAACAGCTAAAGCgctggcttacttgcatgaggcaattgaaccaaaagttgtgcatcgagatattaagtcgagcaatattctgattgatgaggactttaatgccaaaatatcagactttgggttggctaagttacttggtgCTGGAAAAAGCCACATTACAACCAGAGTTATGGGTACTTTTGGATATGTTGCTCCAGAATATGCCAATTCTGGCTTGCTAAacgagaagagtgatgtttatagctttggggtattgctccttgaagcaattacaggaagagaccctgtggATTATAGCCGACCAGCAGCTGAGGTAAATTTGGTTGACTGGCTCAAGATGATGGTGGGGTGTCGACGCTCAGAAGAGGTGTTGGATCCTAACATTGAGACTAGGCCATCGACAAGTGCCCTTAAGCGTGCCCTCTTGACTGCTTTGAGGTGTGTTGATCCAGATGCTGAAAAAAGACCAAGGATGAGCCAAGTTGTTCGTATGCTTGAATCAGAGGAATATCCTATACTGCGAGAGGATCGAAGACGCCGAAGGAGTCAGGCAGGAAACATGGAAGTGGAGACTCAGAGGGAGAATTCTGATACTGATAAGAGCGACAATCCAGATTATAAGCCCAGTGGCAGAAGGAACCAACGCATGTAG 1515 0.3736 MASDLNSGLSKKTFVFGLKVWVLMGIIVGLFIIIILVVLSICLTLRKKFRRVNGKLPLSHVISVSDEIKEIKVDQVPANNHPQNGVFTSLNDKFGDRESEKVLNQTKNGDNSSQSGSSNHLEKDANGSQSGEDSGVKSVSAYRSSSHPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFAKDNVIGEGGYGIVYHGQLINGNPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMRQHGFLTWDARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDEDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPAAEVNLVDWLKMMVGCRRSEEVLDPNIETRPSTSALKRALLTALRCVDPDAEKRPRMSQVVRMLESEEYPILREDRRRRRSQAGNMEVETQRENSDTDKSDNPDYKPSGRRNQRM 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01790 504 MobiDBLite consensus disorder prediction 105 152 - -
Gma15g01790 504 SUPERFAMILY Protein kinase-like (PK-like) 166 462 IPR011009 -
Gma15g01790 504 MobiDBLite consensus disorder prediction 100 154 - -
Gma15g01790 504 SMART serkin_6 182 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01790 504 Gene3D Transferase(Phosphotransferase) domain 1 258 470 - -
Gma15g01790 504 ProSiteProfiles Protein kinase domain profile. 182 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01790 504 Gene3D Phosphorylase Kinase; domain 1 163 257 - -
Gma15g01790 504 MobiDBLite consensus disorder prediction 460 504 - -
Gma15g01790 504 PANTHER OS01G0323000 PROTEIN 2 504 - -
Gma15g01790 504 Pfam Protein kinase domain 183 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01790 504 ProSitePatterns Protein kinases ATP-binding region signature. 188 211 IPR017441 GO:0005524
Gma15g01790 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Gma15g01790 504 CDD STKc_IRAK 188 454 - -
Gma15g01790 504 PANTHER RECEPTOR-LIKE KINASE PLANT 2 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01790 Gma-Chr15 20715694 20720135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01790 17 456 Trihelix Transcription Factor Family AT1G70460 40.225 1.76e-93 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gma15g01790 Pkinase 7.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01790 - - gmx:732653 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01790 15 20715694 20720135 Gma15g01790 15 20715694 20720135 ECH
Gma15g01790 15 20715694 20720135 Gma09g00761 09 9736440 9740827 GST
Gma17g00370 17 3014604 3019530 Gma15g01790 15 20715694 20720135 PCT
Gma15g01790 15 20715694 20720135 Gma17g00370 17 3014604 3019530 PCT