Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01753 ATGGAAGATAAAGCTGCGATAAAAGAATTGCTGGAAGACGAGGAAAACCCATATGATAATACTATGGGATCTACTCTTCTAAGCTTGAGCCTGAATAACTCAGGGCAACCCCTTAACCAAATGGGGATGCTGCGAATCAAGCTTGAGGAAGCAAAGAAAGAGAATGAGATTTTGAAGGCTATGCTGAATCAGGTTAATCAACACTGCACTGCTCTTCAGAATCGCATACTTTTTGAGATGCAGCAGCATCAACTATTTTCATCATCACCTCGCAATGATAATAATAATCATGACTTGCAGGGAAACAAACAAGATGCGGAGAAATTACCAATGCTACACACCCGGCAGTTTTTGAATATGGGCGAGTCTTCATCAATTTTAGACGGCAACACAAAAGCATGTGCAATAGCAGAAAACGCTGAAAAGAAAATGTTAGGCAAAAACCTTGCATGTGATGATAATAAGTACAATGTTGAAGGTGAAATCAACAGTCAAATAACATCGCATGAAGCAAAAAGCACAGAAGATCAAGTATCTGAGGTTACTTGCAGGAGAGCTAGAGTGTCCATAAGAGCAAGATCAGATTTTTCTTCGATGTTTGATGGGTGTCAATGGAGAAAGTACGGACAAAAGACAGCGAAAGGCAACCCTTGTCCTCGAGCCTACTACCGTTGTAGCATGGGAACTGCATGTCCGGTTCGTAAGCAGGTGCAAAGGTGTTTCAAGGATGAGACTGTTCTCATCACAACCTATGAAGGGAACCACAACCATCCCCTCCCACCAGCAGCAAGACCTTTGGCAAGCTCAACATCAGCCGCATTGAACATGTTCCTTTCTGGCTCAATCACAAGCTCACATTCCAGCACCATTCTACCTAACTCACCCCTATCCACTATTTCCCCAAGTACTGCTGTGGCCACTTTCTCCCAAAATGCAACATGCCCCACAGTAACACTGGACTTAACCCAGCCAAATAACAACAACTATCTCCAATTCCAAAGTGCCACCACTTCTTCACAAGACCATACACAATCATTTTTCCCTCTGCCATTGCATGGAAACCCTCAAAATTATTCTGAGGGGTTGATGCACTTGTGGTCTAAGGTTCCAATTCCAACCATGTTAGCCCCAGAGAAAAACCTTGCCCTGGTGGATGTTGTCAGTGAGGCCATAAACAAAGATCCTTCTCTCAAGGCAGCATTGTTTTCAGCCATTTCCTCACTCACTGGAGATCCTGATCAGAAGGACAACATCAATAACATAAGCCAATTACATAGTAAGAGTAGTGGTGGTTATGACCCTTGTTCTAAGATGCCTGCAATACCACCTATTCAGCCTTACACTAAGTTGATTTAG 1356 0.4314 MEDKAAIKELLEDEENPYDNTMGSTLLSLSLNNSGQPLNQMGMLRIKLEEAKKENEILKAMLNQVNQHCTALQNRILFEMQQHQLFSSSPRNDNNNHDLQGNKQDAEKLPMLHTRQFLNMGESSSILDGNTKACAIAENAEKKMLGKNLACDDNKYNVEGEINSQITSHEAKSTEDQVSEVTCRRARVSIRARSDFSSMFDGCQWRKYGQKTAKGNPCPRAYYRCSMGTACPVRKQVQRCFKDETVLITTYEGNHNHPLPPAARPLASSTSAALNMFLSGSITSSHSSTILPNSPLSTISPSTAVATFSQNATCPTVTLDLTQPNNNNYLQFQSATTSSQDHTQSFFPLPLHGNPQNYSEGLMHLWSKVPIPTMLAPEKNLALVDVVSEAINKDPSLKAALFSAISSLTGDPDQKDNINNISQLHSKSSGGYDPCSKMPAIPPIQPYTKLI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01753 451 Gene3D WRKY domain 184 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma15g01753 451 Coils Coil 41 75 - -
Gma15g01753 451 ProSiteProfiles WRKY domain profile. 194 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma15g01753 451 SMART WRKY_cls 199 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma15g01753 451 SUPERFAMILY WRKY DNA-binding domain 193 260 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma15g01753 451 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 13 426 - -
Gma15g01753 451 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 13 426 IPR044810 GO:0003700
Gma15g01753 451 Pfam WRKY DNA -binding domain 201 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01753 Gma-Chr15 19494775 19500393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01753 44 323 WRKY Transcription Factor Family AT4G04450 41.346 1.19e-66 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma15g01753 WRKY 1.2e-22 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01753 15 19494775 19500393 Gma17g00394 17 3188507 3192874 PCT
Gma15g01753 15 19494775 19500393 Gma13g00979 13 23895542 23899527 PCT