Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01742 TTGTTCATCAGTGCTAGACATAAAAATGTGGTCATGTTGTTGGGTTTATGCACAAATAAAAGCCAACTAATGATTGTGTATGAGCAAGTATGCAACGATTCACTTGAACAGTACTTAACAAGGGGAAGTTTCCAGTCATTGACTTCGAAGCAAAGGCTGAAAGTGGCAATTGGTACTGCCAGAGGTTTAAAGTACCTACATGGGAATAACATAATTCATGGAAATATAAAACCAAGTAACATTATTCTAACACATGACTTCGAACCACGGATTGGAGATTTTGACTTTGGAAAAGTGAAACATGGACCAAAGAAATCCAGCAAAGATAATAGTGTACGGAATTCTGGATATGCAGCAGCTGAGTATGTTGAGAATGGAAAAGTATCAAATAAGACAGATGTGTACTCCTTTGGAGTGGTTCTTTTAGAGCTGATCAATAATGATAATAACTTGATATATTATTATGCAAATGAATGTAGGATGAGCCTTAGTGCAATGATAGGGTTGCTACCACTTGACCAGAAAGAAAGGCCTCTACTAGGAGGAAAGAAGTACCCTAAGTTGGTGGATCTGAAAATCAGTAACTCCTATGAAGAAGAAAAACTTCTATGGTTGGTTCAAGTAACAGAACAATGTCTCAGAAAGAATTCTAAGGAAAGAATAACAATGAATATGACATCTAGGAATATCCTTGGAAATGCTATTGAAACTGGTGATAGGGGAGCATCTCATGTTGAGCTACATTGGCCTACTCGTTTGAAGATTATACGAGGAATCGCACATAGAATGCATTATCTTTACACAGTACTTGGTTCCTCGGATCTTCCACACAAGTATCTCAAGTCCAACAATGTTCTCCTTGGACCAGACAATGAACCAATGCTTATAGATTATGGGTTCAGCCACATGGTTAACCCTTCAACCATTGCACAAACACTATTCACTTACAAGGCACCAGAGGCAGCACAACAAGGCCAGTATCTCAAAAATGGAAAGGGTGGGGCTGATGTGGTGCAATGGGTGGAAACTACTATCTCTGAGGGAAGGGAATCAGAGGTGCTTGATCCTGAGATTGCAGGCTCTAGGAATTGGCTTGGTGAGATGGAGCAACTCCTCCACATTGGTGCTGCTTGCACTAAAAGCAACCCTCAGCAGCGGTTAGACATGGCAAAAACTGTTATAAGGATAATGGAGATTAAATTCGAGTGTGGTCATGAATCAACAAGCCTTGCAAATTCTCATCATGCTGAACAATCACAGAGGAGGCATGGAACAAACAGCTTCGGAAGCTGGGATAATATCGAATATGGCAGCTCCTAG 1320 0.4038 LFISARHKNVVMLLGLCTNKSQLMIVYEQVCNDSLEQYLTRGSFQSLTSKQRLKVAIGTARGLKYLHGNNIIHGNIKPSNIILTHDFEPRIGDFDFGKVKHGPKKSSKDNSVRNSGYAAAEYVENGKVSNKTDVYSFGVVLLELINNDNNLIYYYANECRMSLSAMIGLLPLDQKERPLLGGKKYPKLVDLKISNSYEEEKLLWLVQVTEQCLRKNSKERITMNMTSRNILGNAIETGDRGASHVELHWPTRLKIIRGIAHRMHYLYTVLGSSDLPHKYLKSNNVLLGPDNEPMLIDYGFSHMVNPSTIAQTLFTYKAPEAAQQGQYLKNGKGGADVVQWVETTISEGRESEVLDPEIAGSRNWLGEMEQLLHIGAACTKSNPQQRLDMAKTVIRIMEIKFECGHESTSLANSHHAEQSQRRHGTNSFGSWDNIEYGSS 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01742 439 Gene3D Phosphorylase Kinase; domain 1 1 31 - -
Gma15g01742 439 Gene3D Transferase(Phosphotransferase) domain 1 235 332 - -
Gma15g01742 439 ProSiteProfiles Protein kinase domain profile. 1 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01742 439 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 1 225 - -
Gma15g01742 439 Gene3D Transferase(Phosphotransferase) domain 1 333 422 - -
Gma15g01742 439 Gene3D Transferase(Phosphotransferase) domain 1 32 234 - -
Gma15g01742 439 MobiDBLite consensus disorder prediction 410 439 - -
Gma15g01742 439 PANTHER OS01G0253100 PROTEIN 1 225 IPR045271 GO:0004714|GO:0006468
Gma15g01742 439 SUPERFAMILY Protein kinase-like (PK-like) 246 400 IPR011009 -
Gma15g01742 439 MobiDBLite consensus disorder prediction 422 439 - -
Gma15g01742 439 SMART serkin_6 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01742 439 SUPERFAMILY Protein kinase-like (PK-like) 5 224 IPR011009 -
Gma15g01742 439 Pfam Protein tyrosine and serine/threonine kinase 4 147 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01742 Gma-Chr15 19047932 19056621 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01742 238 400 Receptor kinase-like Gene Family AT5G20690 44.681 8.04e-48 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gma15g01742 PK_Tyr_Ser-Thr 6.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01742 - - gmx:102669314 363.229