Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01733 ATGGCTGCTGGTGTCACTGTCAAGTCCGAGGTTCTAGAATCTTCTCCTCCTGAAGGAGTTTGTTCCAACACGGTGGAAAACCACCTGGTCCAGACCAATTTGTCTGATGGGTCACCCAACAAGTCTGTGCCAGCATCTGGACTTGATGCAGTGATTCCTAGTGCAAATCAGCTTACCATCTTCTATAATGGGAGTGTTTGTGTCTATGATGGAATCCCTGCAGAGAAGGTGCATGAAATAATGCTTATTGCTGCTGCTGCTGCCAAGTCCACTGAAATGAAGAAGATTGGGACCCAAACTACCCTCATTTCACCTGTTCCGTCAAGGCCTTCTTCTCCACATGGAATCACTAACAATATTGGTTCCTCACAGAAGAGTTCCATCTGCAGGCTGCAAGCTGAATTCCCAATAGCACGTAGGCATTCACTTCAAAGGTTTCTTGAGAAGCGTCGTGATAGGCTTGGGAGCAAGACACCTTATCCTTCCTCATCAACTACAAAAGTGGCTGACAACATAGAGAACAACTTCTGTGCTGACAATGCACCAGAACTGATTTCCTTGAATCGATCCGAGGAGGAATTTCAGCCAACTGTCTCTGCCTCTTGA 606 0.4653 MAAGVTVKSEVLESSPPEGVCSNTVENHLVQTNLSDGSPNKSVPASGLDAVIPSANQLTIFYNGSVCVYDGIPAEKVHEIMLIAAAAAKSTEMKKIGTQTTLISPVPSRPSSPHGITNNIGSSQKSSICRLQAEFPIARRHSLQRFLEKRRDRLGSKTPYPSSSTTKVADNIENNFCADNAPELISLNRSEEEFQPTVSAS 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01733 201 SMART tify_2 51 86 IPR010399 -
Gma15g01733 201 PANTHER DIVERGENT CCT MOTIF PROTEIN 41 179 - -
Gma15g01733 201 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 41 179 IPR040390 -
Gma15g01733 201 Pfam Jas motif 136 160 IPR018467 -
Gma15g01733 201 MobiDBLite consensus disorder prediction 102 121 - -
Gma15g01733 201 MobiDBLite consensus disorder prediction 1 22 - -
Gma15g01733 201 Pfam tify domain 53 85 IPR010399 -
Gma15g01733 201 ProSiteProfiles Tify domain profile. 51 86 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01733 Gma-Chr15 18876082 18879962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01733 56 167 Tify Gene Family AT5G20900 52.459 2.13e-29 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gma15g01733 tify 1.8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01733 K13464 - gmx:100306524 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01733 15 18876082 18879962 Gma09g00721 09 8693489 8697636 GST
Gma17g00407 17 3295447 3298000 Gma15g01733 15 18876082 18879962 PCT
Gma13g00962 13 23779824 23782534 Gma15g01733 15 18876082 18879962 PCT
Gma15g01733 15 18876082 18879962 Gma17g00407 17 3295447 3298000 PCT
Gma15g01733 15 18876082 18879962 Gma13g00962 13 23779824 23782534 PCT