Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01726 ATGGCTGTTTTCTCTACCAAACAGCTGAGTACTTCAACTCTGACCACTACATTCATCATCTTCTTTGTTCGTTCTGAATTCACGGGACACGGTAGCCTGAGAGTTTCTCCTTCTGAATTCATAGGCTCGGTGACCACAGTAGGTGATGTTTTGCAAAACGTTACCTCCATTCTCAAGTCTGAGCTTAGAAGTGTCAAAAATGACTTTCATCTTCCTGATGCTGCCGTTTCCACGTGTCTTGATTTGTTAGACTTGTCAGCTGATGAACTCAGCTGGTCCATTTCCGCTGTTCAAAGTTCCCAAGGAAATGATAACAGTACAGGGAATCTAAGCTCTGATTTGAGGACATGGCTTAGTGCTGTACTTGCGAATACAGATACATGCATGGATGGTTTTGAAGGTACAAATGGGAATGTGAAGGGTTTAATATCCACTGTAATTGACCAAGCGAAGTGGTTGCTCCAAAAGTTACTGACCCTGGTGAAGCCTTATGTGAATGATTTCAGCAGTAGAAATAGTAGGGTAAAATTTCCTTCATGGATTGAAGCAGAGGATAAGATGTTGCTGCAGACAAATGGGGTGCCTGCAGATACTGTAGTTGCGGCTGATGGAACTGGGAATTTTACTAAGGTGATGGATGCTGTGCAAGCAGCACCTGTTTATAGCATGAGACGCTTTGTGATACACATAAAGAAGGGTGTTTACGAAGAGAACGTTGTGATTAACAAGAAGAAGTGGAACCTTGTGGTGATTGGTGAGGGTATGGATGCCACTGTTATCTCCGGTAATCTGAGTCGTAGTGAAAATTTGACCACATTCAAGACCGCTACCTTTGCTGTGAATGGCAGAGGATTCATAGCAAAAGGCATTACCTTCAGGAACACTGCAGGTCCCCAAAGAAACCAATCTGTTGCTCTAAGATCAGACTCTGACCTCTCTGTATTCTACCGATGTGGGATTTTTGGCTACCAAGACAGCCTCTATGCCCACTCATTGCGCCAATTCTACAGAGAATGCAGAATCAGTGGCACAGTGGATTTCATATTCGGCCATGCCAATGCTGCAACATTTCAAGGTGAAATGTACCCCAATCGATCGTCCGGTTTCTCGATCCAATTCTGCAACATTTCAGCGGATTATGACCTTCTGCCATATCTCAACACCACTTCAACGTACCTCGGTAGACCCTGGAAGCCGTATTCCAGAACAATTTTCATGCAGTCCTACATCAGTGATGTGTTGAGTCCAGAAGGGTGGCTAGAGTGGAATGGAACATTGTATTTGGACACTCTGTTATATGCTGAGTACAAGAATTATGGACCAGGAGCTAGGCTTGATAATAGAGTCAAATGGCCAGGGTATCATGTGATGAATGATTCTAGAGAGGCTTATAATTTCACTGTGGCCAATCTCATTTTGGGGGAGCTATGGTTACCATCAACCGGGGTAACATTCACTCCTGGACTTTGA 1470 0.4401 MAVFSTKQLSTSTLTTTFIIFFVRSEFTGHGSLRVSPSEFIGSVTTVGDVLQNVTSILKSELRSVKNDFHLPDAAVSTCLDLLDLSADELSWSISAVQSSQGNDNSTGNLSSDLRTWLSAVLANTDTCMDGFEGTNGNVKGLISTVIDQAKWLLQKLLTLVKPYVNDFSSRNSRVKFPSWIEAEDKMLLQTNGVPADTVVAADGTGNFTKVMDAVQAAPVYSMRRFVIHIKKGVYEENVVINKKKWNLVVIGEGMDATVISGNLSRSENLTTFKTATFAVNGRGFIAKGITFRNTAGPQRNQSVALRSDSDLSVFYRCGIFGYQDSLYAHSLRQFYRECRISGTVDFIFGHANAATFQGEMYPNRSSGFSIQFCNISADYDLLPYLNTTSTYLGRPWKPYSRTIFMQSYISDVLSPEGWLEWNGTLYLDTLLYAEYKNYGPGARLDNRVKWPGYHVMNDSREAYNFTVANLILGELWLPSTGVTFTPGL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01726 489 Pfam Plant invertase/pectin methylesterase inhibitor 51 144 IPR006501 GO:0004857
Gma15g01726 489 ProSitePatterns Pectinesterase signature 2. 341 350 IPR033131 -
Gma15g01726 489 Pfam Pectinesterase 197 358 IPR000070 GO:0030599|GO:0042545
Gma15g01726 489 SUPERFAMILY Pectin lyase-like 194 488 IPR011050 -
Gma15g01726 489 CDD PMEI-like_4 25 163 - -
Gma15g01726 489 Gene3D - 192 489 IPR012334 -
Gma15g01726 489 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 73 162 IPR035513 -
Gma15g01726 489 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 163 IPR035513 -
Gma15g01726 489 PANTHER PECTINESTERASE 353 488 - -
Gma15g01726 489 PANTHER PECTINESTERASE 35 358 - -
Gma15g01726 489 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 35 358 - -
Gma15g01726 489 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 353 488 - -
Gma15g01726 489 SMART PMEI_2 5 160 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01726 Gma-Chr15 18691243 18693960 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01726 22 489 Carbohydrate Esterase AT3G43270 54.509 0.0 543
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01726 15 18691243 18693960 Gma09g00713 09 8502201 8504886 GST
Gma17g00415 17 3369014 3372685 Gma15g01726 15 18691243 18693960 PCT
Gma13g00955 13 23703865 23708206 Gma15g01726 15 18691243 18693960 PCT
Gma15g01726 15 18691243 18693960 Gma17g00415 17 3369014 3372685 PCT
Gma15g01726 15 18691243 18693960 Gma13g00955 13 23703865 23708206 PCT