Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01721 ATGGCTCATTCATCTCATAAACTCTTTTTCCTTCTGCTTTCAATCTTCTTCTCACACACCTGTGCTGTAAACTCTTCCAATGCTTCCACAACACTTCATACCAATCTCTCTTCCTTAAAATCTTTCTGCACAACCACTCCATACCCAGAAGTTTGTTCCAATTCATTGAAGCTATCCATCTCAATAAACATAAGTCCAAACATAATCAACTACCTCCTTCAGTCCCTCCAAGTAGCAATATCTGAAACCACAAAGCTCTCAAATCTCTTCCACAACGTTGGACACTCAAACATCATAGAGAAGCAAAGAGGAGCTGTTCAAGACTGCAGGGAACTCCACCAATCCACATTAGCTTCTTTGAAAAGATCACTATCAGGGATCCGTTCCTCCAACTCCAAGAACATAGTTGATGCAAGAGCTTACCTCAGTGCAGCACTCACCAACAAGAACACATGTCTAGAAGGACTAGATTCTGCTTCTGGAATAATGAAGCCATCTCTGGTGAAATCTGTGATCGACACTTACAAGCATGTCAGTAACTCTCTTTCAATGCTCCCTAAGCCAGAGATGGGGGCACCCAATGCGAAAAAGAATAACAAGCCTTTGATGAATGCTCCAAAGTGGGCATCAAGCAGTGACCAAAGGCTCTTTGAAGACTCAGATGGGGAAAATTATGACCCAAATGAAATGCTTGTTGTGGCTGCAGATGGAACTGGGAACTTTAGCACCATCACTGAAGCCATCAACTTTGCTCCGAATAACAGCATGGATAGGATAGTCATCTATGTCAAAGAAGGGATTTACGAGGAAAATATAGAAATCCCAAGCTATAAGACCAACATTATGATGCTTGGCGATGGAAGTGATGTGACTTTCATAACTGGTAACAGAAGCGTCGGTGATGGCTGGACCACTTTCAGATCTGCAACTCTAGCTGTCTTTGGTGATGGTTTTCTGGCACGTGATATTGCGATTGAAAACAGCGCAGGGCCAGAGAAGCATCAAGCAGTGGCCTTGAGGGTAAATGCAGACCTAACAGCTTTCTACAGGTGTGCAATTTATGGCTACCAAGACACTCTATATGTCCACTCCTTTAGACAATTCTATAGAGAGTGTGACATTTATGGTACCATTGATTACATATTTGGAAATGCAGCAGTGATTCTACAAGAATGTAACATCATATCAAGAAAACCAATGCCTGGTCAATTCACAGTAATCACTGCACAATCTAGAGATAGCCCAGATGAGGACACTGGTATCTCATTCCAAAATTGCTCAATCATAGCAACTCTTGATCTCTATTCCAACTCTAGCAGCTTCAAGAGCTACCTTGGGAGGCCATGGAGGGTGTATTCTCGCACTGTTTACCTTGAGTCCTACATTGATGACTTCATTGACGCAAAGGGTTGGACAAAGTGGTCTAATGAGCAAGGATTGAACACTTTGTATTACGGAGAGTATGACAACTATGGACCTGGTTCCGGCACAGAGAAGCGTGTGCAATGGTTTGGGTACCATTTGATGGATTATGGTGATGCCTATAATTTCACAGTTTCGCAGTTCATCAATGGAGATGGTTGGCTTGATACTACGTCCGTTCCTTATGATGATGGGATTTGA 1623 0.4264 MAHSSHKLFFLLLSIFFSHTCAVNSSNASTTLHTNLSSLKSFCTTTPYPEVCSNSLKLSISINISPNIINYLLQSLQVAISETTKLSNLFHNVGHSNIIEKQRGAVQDCRELHQSTLASLKRSLSGIRSSNSKNIVDARAYLSAALTNKNTCLEGLDSASGIMKPSLVKSVIDTYKHVSNSLSMLPKPEMGAPNAKKNNKPLMNAPKWASSSDQRLFEDSDGENYDPNEMLVVAADGTGNFSTITEAINFAPNNSMDRIVIYVKEGIYEENIEIPSYKTNIMMLGDGSDVTFITGNRSVGDGWTTFRSATLAVFGDGFLARDIAIENSAGPEKHQAVALRVNADLTAFYRCAIYGYQDTLYVHSFRQFYRECDIYGTIDYIFGNAAVILQECNIISRKPMPGQFTVITAQSRDSPDEDTGISFQNCSIIATLDLYSNSSSFKSYLGRPWRVYSRTVYLESYIDDFIDAKGWTKWSNEQGLNTLYYGEYDNYGPGSGTEKRVQWFGYHLMDYGDAYNFTVSQFINGDGWLDTTSVPYDDGI 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01721 540 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 187 IPR035513 -
Gma15g01721 540 SUPERFAMILY Pectin lyase-like 228 537 IPR011050 -
Gma15g01721 540 SMART PMEI_2 34 184 IPR006501 GO:0004857
Gma15g01721 540 Gene3D - 226 540 IPR012334 -
Gma15g01721 540 ProSitePatterns Pectinesterase signature 2. 374 383 IPR033131 -
Gma15g01721 540 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 185 IPR035513 -
Gma15g01721 540 Pfam Plant invertase/pectin methylesterase inhibitor 38 184 IPR006501 GO:0004857
Gma15g01721 540 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 185 IPR006501 GO:0004857
Gma15g01721 540 PANTHER PECTINESTERASE 7 539 - -
Gma15g01721 540 PANTHER PECTINESTERASE 7 539 - -
Gma15g01721 540 MobiDBLite consensus disorder prediction 186 223 - -
Gma15g01721 540 CDD PMEI-like_3 41 184 - -
Gma15g01721 540 Pfam Pectinesterase 231 526 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01721 Gma-Chr15 18658170 18660227 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01721 20 540 Carbohydrate Esterase AT2G26440 65.977 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01721 - - gmx:100776969 1059.28