Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01719 ATGTTAGGCTCTTTCCCCTTTGCTTTCTTGCATGAGCGTTTGGGATTTTATCATTGTTTGGGCATGCACGTGTGGACGAGAGATGTTTCAGTTCAAGTCGATCTCTCTTCCATAAGATCTTTCTGCATAACCACCCCATACCCAGAAGTTTGTTTCAATTCACTGAATGTGTCCATCCCAATAGACACAAATCCAAACTCAAACAGCTACTTCCTTCAGTCCCTCCAAGTAGCAATATATGAAACCACTAAGCTGTTAAATCTCTTCAACAATGTTAGACCCTCAAACATCAAAGAGAAGCAAAAAGGAGCAATTCAAGATTGCAGGGAACTCCACCAATCCACATTGGCTTCTCTAAAAAGATCACTATCGGGGATCAGTTCCTTCAAAATAACCCTAATTGATGCAAGAATATACCTCAGTGCAGCCCTGTCCAACAAGAACACATGCCTAGAAGGCCTAGATTCTGCTTCTGGTACCATGAAGCCAGTTCTGGTGAAATCTGTGGTCAACACTTACAAACATGTAAGTAATTCTCTTTCAATTCTCTCAAACCCTGAGATGGGGTCTCCTGAAAACCAGTCTTTGGTGGGTGATTCAAAGTGGCTATCTAGCACTGACCTAGGGTTCTTTCAAGACTCAGATGGGGATGGATATGACCCAAATGAAGTGATTGTTGTGGCTGTAGATGGAACTGGGAAATTTAGCACCATCactgtCAGGGATAGAACAGTGATCCGTGTCAAAGAAGGGATTTACAAGGAAAATGTGGTAATCCAAAGCTATAAGATCAACATTGTGATGCTTGGCGATGGAAGTGATGTCACTGTCATAACTGGTAACAGAAGCGTAGGTGATGGATGCACCACTTTCAATTCTGCAACTCTAGCGGTTTCTGGTGAAGGATTTCTGGCACGTGATATAGCTTTTAACAACAGCGCAGGGCTAGAGAAGCAGCAAGCAGTGGCCTTGAGGGTAAATGCAGACTTAACTGCTTTTTACAGGTGTGCAATTCATGGTTACCAAGACACTTTATTCGTTCACTCCTTTAGACAATTCTATAGAGAGTGTGACATTTATGGGACCATAGATTTCATATTTGGAAATGCAGCAGTGGTTCTACAAGGATGTAACATTGTATCCAAAAAACCACTGCCTGGCCAATACACTGTTATCACTGCACAATCCAGAGATAGCCCAAATGAGAACACTGGCATCTCAATCCAATACTACTCAATCAAAGCTAACTTTGATGACTCTAGTGTGAAGAGCTACCTTGGGAGGCCATGGAGGATATATTCTCGCACCGTTTACCTTGAGTCCTACATTGATGACTTCATTGACCCAAAGGGTTGGACAAAGTGGTCTAATGAGCAAGGATTGGACACCTTGTATTACGGAGAGTTTGACAATTATGGACCCGATTCCAGCACTGATAACCGTGTACAATGGTCTGGactctataaatag 1470 0.4218 MLGSFPFAFLHERLGFYHCLGMHVWTRDVSVQVDLSSIRSFCITTPYPEVCFNSLNVSIPIDTNPNSNSYFLQSLQVAIYETTKLLNLFNNVRPSNIKEKQKGAIQDCRELHQSTLASLKRSLSGISSFKITLIDARIYLSAALSNKNTCLEGLDSASGTMKPVLVKSVVNTYKHVSNSLSILSNPEMGSPENQSLVGDSKWLSSTDLGFFQDSDGDGYDPNEVIVVAVDGTGKFSTITVRDRTVIRVKEGIYKENVVIQSYKINIVMLGDGSDVTVITGNRSVGDGCTTFNSATLAVSGEGFLARDIAFNNSAGLEKQQAVALRVNADLTAFYRCAIHGYQDTLFVHSFRQFYRECDIYGTIDFIFGNAAVVLQGCNIVSKKPLPGQYTVITAQSRDSPNENTGISIQYYSIKANFDDSSVKSYLGRPWRIYSRTVYLESYIDDFIDPKGWTKWSNEQGLDTLYYGEFDNYGPDSSTDNRVQWSGLYK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01719 489 PANTHER PECTINESTERASE 29 487 - -
Gma15g01719 489 ProSitePatterns Pectinesterase signature 2. 359 368 IPR033131 -
Gma15g01719 489 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 185 IPR035513 -
Gma15g01719 489 TIGRFAM PME_inhib: pectinesterase inhibitor domain 31 184 IPR006501 GO:0004857
Gma15g01719 489 SUPERFAMILY Pectin lyase-like 221 487 IPR011050 -
Gma15g01719 489 Pfam Pectinesterase 225 487 IPR000070 GO:0030599|GO:0042545
Gma15g01719 489 SMART PMEI_2 33 182 IPR006501 GO:0004857
Gma15g01719 489 Pfam Plant invertase/pectin methylesterase inhibitor 37 182 IPR006501 GO:0004857
Gma15g01719 489 Gene3D - 220 489 IPR012334 -
Gma15g01719 489 CDD PMEI-like_3 40 186 - -
Gma15g01719 489 PANTHER PECTINESTERASE 29 487 - -
Gma15g01719 489 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 184 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01719 Gma-Chr15 18616114 18621970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01719 36 488 Carbohydrate Esterase AT2G26440 59.792 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01719 - - gmx:102665651 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01719 15 18616114 18621970 Gma15g01719 15 18616114 18621970 ECH
Gma15g01719 15 18616114 18621970 Gma09g00708 09 8443906 8446080 GST