Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01718 ATGGCGTTCCAGGATTTCGACATGATCACCGAGAGGCGGAGAAACGAGCAGAGGCTCAAGATGAAGAAGAAGATCCTCATCAGCGTCGTCTCCGCCGTCCTCCTCGCGTGCGTCGTAGGCGCCGCGGCATTCGTCGTTGTCCAAAGAACAGGCACTAATGCAAAGCACGCTACCCCAATGCCACAGAACACCGCCACGCCGCACGTGGATCAGAACTCCAGGATGGTGAAAATGATCTGTGGATCCGCAGAATACAAAGAAAAATGCGAAAGCACGCTCGAAGAAGCCCTAAAGAAGGACCCCAAATTGGCTCAACCCAAGGATCTTATCATGGTGTCAATGATTCTTGCGGAGAAGGAGGTTACCAATGCCTTCGATGGAACTGCAAAGATGATGGGCAATGCGTCCGAGGAAGAGAAGGGTGCGTACGAGGATTGCAAGGGTTTGTTCAAGGACGCCAAGGAAGAGCTTGAGCTGTCGATCACCGAGGTTGGCGACAACGACGCGGACAAGCTCTCCACAAAGGGTGCTGAACTGAACAACTGGCTCAGTGCGGTTATGTCTTACCAACAAACCTGCATTGATGGTTTCCCCGAAGGGAAGATCAAGGATGATTTCACCAGCATGTTTACTAACTCTAGGGAGCTTGTGAGCAATTCTCTTGCGGTTGTTTCGCAGTTTTCTTCCTTCTTTTCGATCTTCCAAGGCGCCGGGGGGATTCATCTTCCTTGGGAGACTACCAGTGATGATGCACTGGCACCTACTGCTTCTGGTTCTGCTTCTGGTGCCGGTGCTGGTGCTGGTGCTGGGTCTGTGTTCGGTTCTGATCCCTCTTCTTTTGGTCTTGGTTATGCTTCtgctcctgctggtggtgttgctcttgctcctggtgttgctcctgctcccggtgCTGCCCCTGGCCCAGTTCCTTCTTTGCCTGCTGGTTCAATTCCTGCATGGACGGGCTCAGTTCCTGTTTGGGCCGGCCCATCCGAGTTCTTGGGATCAAATGAAAAGCCCACACCTAATGTTACCGTGGCCCAAGATGGCAGCGGAAACTTCAAAACCATCTCTGAAGCTTTGGCTGCCATCCCACCACAATACGACGGAagGTACGTGGTTTATGTCAAAGAAGGAGTGTACGATGAGACCGTGACAGTGACAAAGAAAATGGTAAATTTAACCATGTACGGTGACGGACAGCAAAAGAGTATCGTCACTGGAAACAAAAATTTCGTGGATGGAGTCAGGACCTTCCAAACTGCATCATTTGTTGTACTTGGAGAGGGATTCTTGGGGAAAGACATGGGATTCAGAAACACAGCCGGTGCAGAGAAGCACCAAGCAGTGGCCGCAAGAGTGCAAGCCGACCGAGCCATATTCTTCAACTGCGCCTTCGAGGGCTACCAAGACACTCTCTACGCCCAAACCCACAGACAATTCTACCGCGACTGCTACATCTCTGGAACAATCGACTTCATCTTCGGCGACGCCTCCGCGGTGTTCCAGAACTGCACCATGGTGGTAAGAAAGCCACTGGAGAACCAGCAGAACATCGTGACAGCACAAGGGAGGCTCGACAAGCAGGAGAACACCGGCTTCGTCCTCCAGAAATGCGTGATCAAGGCCGACACCGACTTGGTACCCCTCAAAGACACAATCAAGAACTACCTCGGAAGGCCGTGGAAGGAGTATTCAAGAACCATCATCATGGAGACTCAGATTGATGACCTAATTCACCCTGATGGGTTTCTTCCTTGGGAAGGGAACTTTGCCCTAAGCACACTTTACTATGGTGAGTACAACAACAATGGGGCTGGTTCTAGCACCACTGCTAGGGTTAATTGGCCTGGCCGCAAAGTCATCAATAGGGATGAGGCTACCAGGTACACGGTTGAGGCTTTCTTGCAAGGGACATGGATCAATGGCACAGGTGTACCAGCTCAACTAGGCCTGTACAGTTAA 1965 0.4997 MAFQDFDMITERRRNEQRLKMKKKILISVVSAVLLACVVGAAAFVVVQRTGTNAKHATPMPQNTATPHVDQNSRMVKMICGSAEYKEKCESTLEEALKKDPKLAQPKDLIMVSMILAEKEVTNAFDGTAKMMGNASEEEKGAYEDCKGLFKDAKEELELSITEVGDNDADKLSTKGAELNNWLSAVMSYQQTCIDGFPEGKIKDDFTSMFTNSRELVSNSLAVVSQFSSFFSIFQGAGGIHLPWETTSDDALAPTASGSASGAGAGAGAGSVFGSDPSSFGLGYASAPAGGVALAPGVAPAPGAAPGPVPSLPAGSIPAWTGSVPVWAGPSEFLGSNEKPTPNVTVAQDGSGNFKTISEALAAIPPQYDGRYVVYVKEGVYDETVTVTKKMVNLTMYGDGQQKSIVTGNKNFVDGVRTFQTASFVVLGEGFLGKDMGFRNTAGAEKHQAVAARVQADRAIFFNCAFEGYQDTLYAQTHRQFYRDCYISGTIDFIFGDASAVFQNCTMVVRKPLENQQNIVTAQGRLDKQENTGFVLQKCVIKADTDLVPLKDTIKNYLGRPWKEYSRTIIMETQIDDLIHPDGFLPWEGNFALSTLYYGEYNNNGAGSSTTARVNWPGRKVINRDEATRYTVEAFLQGTWINGTGVPAQLGLYS 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01718 654 ProSitePatterns Pectinesterase signature 2. 487 496 IPR033131 -
Gma15g01718 654 TIGRFAM PME_inhib: pectinesterase inhibitor domain 66 226 IPR006501 GO:0004857
Gma15g01718 654 SMART PMEI_2 71 223 IPR006501 GO:0004857
Gma15g01718 654 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 45-RELATED 14 652 - -
Gma15g01718 654 Gene3D - 337 652 IPR012334 -
Gma15g01718 654 PANTHER PECTINESTERASE 14 652 - -
Gma15g01718 654 CDD PMEI-like_3 79 224 - -
Gma15g01718 654 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 75 228 IPR035513 -
Gma15g01718 654 Gene3D Invertase/pectin methylesterase inhibitor family protein 72 227 IPR035513 -
Gma15g01718 654 SUPERFAMILY Pectin lyase-like 340 647 IPR011050 -
Gma15g01718 654 Pfam Pectinesterase 343 638 IPR000070 GO:0030599|GO:0042545
Gma15g01718 654 Pfam Plant invertase/pectin methylesterase inhibitor 76 222 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01718 Gma-Chr15 18613622 18615977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01718 342 653 Carbohydrate Esterase AT2G26450 63.898 4.37e-147 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01718 - - gmx:100807628 1203.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01718 15 18613622 18615977 Gma15g01718 15 18613622 18615977 ECH
Gma15g01718 15 18613622 18615977 Gma09g00707 09 8434767 8437721 GST
Gma17g00417 17 3379147 3381504 Gma15g01718 15 18613622 18615977 PCT
Gma13g00953 13 23695748 23698079 Gma15g01718 15 18613622 18615977 PCT
Gma15g01718 15 18613622 18615977 Gma17g00417 17 3379147 3381504 PCT
Gma15g01718 15 18613622 18615977 Gma13g00953 13 23695748 23698079 PCT