Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01714 ATGGCTTCTACTTCTGATTCCGTTCCTTCTTTCACCGCTGTCGGATACACACGCACTGACGCTACTTCTCCACCAAACAACCACCACCTATCCTCGCTATCACACGTCACTCTCATTACCGTAACGGTCCTCGCCGTCGCCGTTACGGTTTCCTTAGCCTTGTACTTCCTTCTCCGCTACCGTAACAGTAACCGTTTTCGTTTCCTCCGTCGAGTCTCTCCGTCGACATCCGCCGCAGCGTTCTCCTCCTCCGGCAATCGGATATTGCCGGAAACCACTTCTTCGTCTTCCGTTTTCGACTTGCTCCCGACGTTCACCTTCTCCTCCATCACGCGCCGCGCCGACGCCGCTGGCGGCGGCGACTGCGCCGTTTGTTTGTCGAAGTTCGAGCAGAACGACCTTCTCCGCTTGCTACCTCTCTGCTGCCACGCATTTCACGCGGAATGCATCGACACGTGGCTTCGGTCGAAGCTCACGTGTCCGCTCTGCCGATCCACTGTCGCCGCGTCTGAATCCGACCTCGCGATGGTTTTCCGGTCGTCGTCCGTCGCTGGCAGCGACAGCTTCCGGCTGGAGATAGGGAACATTAGTAGCCGCCGCGAAGGAGATATCACCGCCGTTGCCGGAGAAACGCGCGGAAGGTCATATTCCGTTGGCGCGTTCGAGTATCTCATTGACGAGGAAGCTGAGGTTGAGGTCGAGGTTGCGTTCGGTTTAGCTGACCGGAGAATCGTTTCCGGCGAGAAAAACGACGGTGCTCCGGTGGTGGCTCCGGCGGATTCTCTAGCTGGTGAGGTAGGGCGTGGTGGTGGAAGTAGAAATGGTAATGGCTGGTTGAAGGATTACGTTGATCGTCTTTCGAATACGGTGTCGTTTCGGAGTTCTGGAAGCTTCTTCACTGGGAGCAGTCGCCGAAGCGACGTCGTTTTGGGAGGAGATTACGATGTAGAAGCGAGCCGTTTCGGGGACGAAATCGGTGAAATGTTCCGATGGCTCTCAGGGGTTTGA 1008 0.5665 MASTSDSVPSFTAVGYTRTDATSPPNNHHLSSLSHVTLITVTVLAVAVTVSLALYFLLRYRNSNRFRFLRRVSPSTSAAAFSSSGNRILPETTSSSSVFDLLPTFTFSSITRRADAAGGGDCAVCLSKFEQNDLLRLLPLCCHAFHAECIDTWLRSKLTCPLCRSTVAASESDLAMVFRSSSVAGSDSFRLEIGNISSRREGDITAVAGETRGRSYSVGAFEYLIDEEAEVEVEVAFGLADRRIVSGEKNDGAPVVAPADSLAGEVGRGGGSRNGNGWLKDYVDRLSNTVSFRSSGSFFTGSSRRSDVVLGGDYDVEASRFGDEIGEMFRWLSGV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01714 335 Pfam Ring finger domain 121 164 IPR001841 -
Gma15g01714 335 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 1 323 - -
Gma15g01714 335 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 323 - -
Gma15g01714 335 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 173 IPR013083 -
Gma15g01714 335 SUPERFAMILY RING/U-box 115 169 - -
Gma15g01714 335 CDD RING-H2_PA-TM-RING 121 164 - -
Gma15g01714 335 SMART ring_2 122 163 IPR001841 -
Gma15g01714 335 ProSiteProfiles Zinc finger RING-type profile. 122 164 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01714 Gma-Chr15 18515014 18516021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01714 96 236 C3H Transcription Factor Family AT2G18650 31.683 1.44e-22 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01714 K10663 - gmx:100804962 597.816