Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01713 ATGACAACAACAATAAACTTTTATCATTTTCCCTCACCCCCTTATTCTATTTCCCTTGGATTTTATTATATCAAAAGGGGTGTGTCAAGACATTGTAGTCTCCTTGCTGTCCTGAGTGGTAAATCACGTGACATTAAGCAAAAACAGAAGCAGGGTACTGCTTCTGAGGATCAATTTCCTTATCCCTTTCCAGAACTTTCTTCCTCTGGTCGTCTTGAGGTCAAGGTATTGACCAAACCTACGGCTGATGAACTCGGTCGATCTCTTGAACAACTGCAGCCGGATTTTGTTTACCTGCAAGGTCAGCAGCTTGAAGATAGCGAGGAAATTGGGCCTCTTGTATGGGAAGATTTTGACCTGTCTGTCCCAGAAGCCTTGTGTGGATTGTTTTCTTCCAAAATACCTAATACTGTTTATTTGGAAACTCCTAAGGGAGAAAAATTGGCAGAGGCACTCCTTAATAAGGGAGTTCCATACACTATCTATTGGAAAAATGATTTTTCAAAGTATGCAGCTTCACATTTTCGACATTCTTTTTTCTCTGTGGCACAGAGTACATCCAGCCATACATGGGATGCTTTTCAGCTTGCTCTGGCATCTTTTAGACTATACTGTGTACAAAACAATGTCTTACCTTCTAACAGCCATAAGGGTGCTGGAAAGCTTGGGCCACAAATTCTTGGGGTTCCTCCCAACATTGATGTCAGTCCATGTGTAGCAGACATGAAGGAAGAGGAAGGTTCACCGGAGACTATTTCTTCTCTAAAGATATATGATGATGATGTGAACATGAGATTTCTTATTTGTGGAGTTCCCTGCACATTGGATGCTTGCTTGTTGGGGTCATTAGAGGATGGACTCAATGCTCTTCTATTTGCAGAAATACGTGGATGCAAACTTCACAACCGGACAAGTGCAACACCACCACCTCTCCAGGCAGGAACATTCTCACGTGGTGTAGTGACTATGCGTTGTGATATATCAACATGTAGTTCTGCTCATATATCACTTTTGGTGTCTGGTAGTGCAGACACTTGTTTTAATGATCAGGCATGGCTTTTGGAGAATCATATTAAAAAAGAGCTGATTGAGAAGAGTCAACTTGTCCAGGCATTTCCTAATCATCAACAAAGTAAAGCACCTTCATCCGAGCCTCGAAGATCAGCCTCAGTAGCGTGTGGATCTAGTGTGTTTGAAGTTTGTATGCGAGTTCCTGCATGGGCTTCACAGGTTCTGAGACAGCTTGCACCCAATTTGGCATACCGCAGCCTTGTTATGTTGGGAATTGCTAGTATTCAGGCATTGCCAGTTGCATCTTTTAGTAAAGATGATGCCGAGCGCCTTCTTTTCTTTTGTACTAGGCAGGAGAAAGAAAACTGTCCTAAGGATCATGTTTTCTCTGGTATTCCAAGTTGGCTGAAGCCTCCACCACCCAGTCGAAAAAGATCTGAACCATGCTCTAGTTCAAAGTCTATTAATGCTAGTGGCCGGGGAGTTGAAGCTATTGGCAGTCATAGACAGAAATTTATTGTTGCTTCTATGAGGCCAATCCCTCACTCTAATAGACACAAGATTCTCCCCTTTTCTGGATTGTCTGAGGGTACAAGATATGATGGAGACCATGGAAAATCAAATCTACCACTTGCTCTTATTAAGCATAATGTTTCAGGCCCTACTTCAGTTACAAATAGGAAATCTGTGTCGAATTCATTTCAAGCTCACCAGATTATTTCTTTGAATCCACTACCTATGAAAAAGCATGGTTGTGACAGAGCTCCAATACGAGCTTGCTCTGAGGAGGAATTCTTGAGGGATGTAATGCAGTTTTTGATACTTCGGGGGCATAATCGTCTAATTCCGCCTGGTGGACTTTCTGAGTTCCCTGATGCCATTTTGAATGCAAAACGCCTTGACCTGTTCAACTTGTATAGGGAGGTGGTTTCAAGAGGAGGCTTTCATGTTGGAAATGGTATCAATTGGAAAGGGCAAGTTTTCTCAAAGATGCGCAATCATACTATGACAAATAGAATGACAGGGGTTGGCAATACACTCAAAAGACATTATGAAACTTATCTCTTAGAATACGAATTATCTCATGATGACGTAGATGGAGAGTGCTGCTTGATGTGTCACAGTAGTGCAGCAGGTGACTGGGTGAACTGTGGTGTATGTGGTGAGTGGGCTCATTTTGGCTGTGACAGGCGGCAAGGACTTGGAGCATTTAAGGACTATGCTAAAACCGATGGGCTGGAGCTTCTTGAGTATGACATCAATGACACTATAACCCTTGTTGATAAGCTTCTCAATAAACTTATAGGAGCATAA 2325 0.4237 MTTTINFYHFPSPPYSISLGFYYIKRGVSRHCSLLAVLSGKSRDIKQKQKQGTASEDQFPYPFPELSSSGRLEVKVLTKPTADELGRSLEQLQPDFVYLQGQQLEDSEEIGPLVWEDFDLSVPEALCGLFSSKIPNTVYLETPKGEKLAEALLNKGVPYTIYWKNDFSKYAASHFRHSFFSVAQSTSSHTWDAFQLALASFRLYCVQNNVLPSNSHKGAGKLGPQILGVPPNIDVSPCVADMKEEEGSPETISSLKIYDDDVNMRFLICGVPCTLDACLLGSLEDGLNALLFAEIRGCKLHNRTSATPPPLQAGTFSRGVVTMRCDISTCSSAHISLLVSGSADTCFNDQAWLLENHIKKELIEKSQLVQAFPNHQQSKAPSSEPRRSASVACGSSVFEVCMRVPAWASQVLRQLAPNLAYRSLVMLGIASIQALPVASFSKDDAERLLFFCTRQEKENCPKDHVFSGIPSWLKPPPPSRKRSEPCSSSKSINASGRGVEAIGSHRQKFIVASMRPIPHSNRHKILPFSGLSEGTRYDGDHGKSNLPLALIKHNVSGPTSVTNRKSVSNSFQAHQIISLNPLPMKKHGCDRAPIRACSEEEFLRDVMQFLILRGHNRLIPPGGLSEFPDAILNAKRLDLFNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTMTNRMTGVGNTLKRHYETYLLEYELSHDDVDGECCLMCHSSAAGDWVNCGVCGEWAHFGCDRRQGLGAFKDYAKTDGLELLEYDINDTITLVDKLLNKLIGA 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01713 774 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 1 752 IPR042293 -
Gma15g01713 774 Gene3D - 591 708 IPR036431 GO:0003677
Gma15g01713 774 MobiDBLite consensus disorder prediction 471 500 - -
Gma15g01713 774 ProSiteProfiles ARID domain profile. 596 700 IPR001606 GO:0003677
Gma15g01713 774 SUPERFAMILY ARID-like 597 711 IPR036431 GO:0003677
Gma15g01713 774 Pfam ARID/BRIGHT DNA binding domain 599 696 IPR001606 GO:0003677
Gma15g01713 774 SMART ARID_2 593 696 - -
Gma15g01713 774 CDD ARID 598 696 - -
Gma15g01713 774 PANTHER ARID/BRIGHT DNA-BINDING DOMAIN PROTEIN 1 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01713 Gma-Chr15 18479002 18487725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01713 26 753 ARID Transcription Factor Family AT3G43240 65.937 0.0 958
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Gma15g01713 ARID 7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01713 - - gmx:100775894 1460.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01713 15 18479002 18487725 Gma15g01713 15 18479002 18487725 ECH
Gma15g01713 15 18479002 18487725 Gma09g00684 09 8104510 8112580 GST