Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01702 ATGGATAGCGATGGAGGCTCCAAATTGACTGGGATTAGGCAGATTGTGAAGATAAAGGAAATGCTCCAGAAGTGGCAAAGTGTGACATTAGGCCCAAAACCTTGCAATTCCCTTTCTGATCATGTGGCTAATGATGATGGAAGCATATCACCATTGATCAACAAAAGGGTAGTGAATGTGATATCGGACAACGAAGACAGTTGCCAAAGTCCTGCAGAACCGCTTCCGCCAGCTGATGTTCCAAAAGGGTACTTGGCAGTGTATGTTGGACCTGAGCTTAGGAGGTTCATCATTCCCACCAGCTACCTTAGCCACTCTCTCTTCATAGTTTTGCTGGAAAAGGCTGCAGAGGAATTCGGGTTTGATCAGAGTGGTGGCCTCACCATCCCATGTGAGATTGAGACCTTCAAGTACCTGCTCAAGTGCATGGAGAATGAGCAGAAAGAGCAACTCGGTGACAGTGCCCCTGGAAGCTCAAGGACTGTGGAAGAGTAA 495 0.4747 MDSDGGSKLTGIRQIVKIKEMLQKWQSVTLGPKPCNSLSDHVANDDGSISPLINKRVVNVISDNEDSCQSPAEPLPPADVPKGYLAVYVGPELRRFIIPTSYLSHSLFIVLLEKAAEEFGFDQSGGLTIPCEIETFKYLLKCMENEQKEQLGDSAPGSSRTVEE 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01702 164 Pfam Auxin responsive protein 75 142 IPR003676 GO:0009733
Gma15g01702 164 PANTHER SMALL AUXIN-UP RNA-RELATED 7 153 - -
Gma15g01702 164 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 153 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01702 Gma-Chr15 18191883 18195068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01702 1 157 Calmodulin-binding Proteins AT5G20810 65.031 1.65e-66 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01702 K14488 - gmx:100819193 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01702 15 18191883 18195068 Gma15g01702 15 18191883 18195068 ECH
Gma15g01702 15 18191883 18195068 Gma09g00671 09 7864847 7868688 GST
Gma17g00433 17 3528726 3530720 Gma15g01702 15 18191883 18195068 PCT
Gma13g00936 13 23508758 23509868 Gma15g01702 15 18191883 18195068 PCT
Gma15g01702 15 18191883 18195068 Gma17g00433 17 3528726 3530720 PCT
Gma15g01702 15 18191883 18195068 Gma13g00936 13 23508758 23509868 PCT